RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 HCSTQ9UBK5 93 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 ACTL7AQ9Y615 435 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 COPG1Q9Y678 874 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 DOCK4Q8N1I0 1966 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 MIA3Q5JRA6 1907 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 RGSL1A5PLK6 1076 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 FAM155AB1AL88 458 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 RNASEH1O60930 286 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 XRCC1P18887 633 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 HTR7P34969 479 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 PPARGP37231 505 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 SERPINH1P50454 418 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CCNHP51946 323 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 AQP4P55087 323 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CDKN2DP55273 166 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 NKX3-2P78367 333 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 NRG1Q02297 640 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 SULT2A1Q06520 285 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CEACAM7Q14002 265 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 TECRLQ5HYJ1 363 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 RAP1GAP2Q684P5 730 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 FBXL22Q6P050 247 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 PIM3Q86V86 326 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 KBTBD6Q86V97 674 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 PDSS2Q86YH6 399 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 MIB1Q86YT6 1006 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 COLGALT2Q8IYK4 626 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 HMGCLL1Q8TB92 370 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 ARRDC2Q8TBH0 407 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 PTCD2Q8WV60 388 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 IFT43Q96FT9 208 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 C1orf74Q96LT6 269 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CDRT15Q96T59 188 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 MRPL57Q9BQC6 102 aaKnown RBP9.43□□□□□ -0.9
NECAP1-225ENST00000640209 CRISPLD1Q9H336 500 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 ARNT2Q9HBZ2 717 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 TBC1D13Q9NVG8 400 aa9.43□□□□□ -0.9
NECAP1-225ENST00000640209 VWA8A3KMH1 1905 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 A8MT66 165 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 MUSKO15146 869 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 CFLARO15519 480 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 OAZ2O95190 189 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 SLC10A3P09131 477 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ZCCHC18P0CG32 403 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 THRAP10827 490 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 TSPAN8P19075 237 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ACVRL1P37023 503 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ATXN3P54252 364 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 MS4A2Q01362 244 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 POU4F1Q01851 419 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 CYLC2Q14093 348 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 HNRNPDQ14103 355 aaKnown RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PPP1R3AQ16821 1122 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 FAM26DQ5JW98 314 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 SIRPB2Q5JXA9 342 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 RASIP1Q5U651 963 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ACAD11Q709F0 780 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 MON1AQ86VX9 555 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 GDPD5Q8WTR4 605 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 HDAC10Q969S8 669 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 TUBGCP5Q96RT8 1024 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 NPAS2Q99743 824 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ZYG11BQ9C0D3 744 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PIDD1Q9HB75 910 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 GTSE1Q9NYZ3 720 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 CLIC5Q9NZA1 410 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 A0A087X1B8 175 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 HEATR9A2RTY3 570 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 TCAF2A6NFQ2 919 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 INPPL1O15357 1258 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 VNN2O95498 520 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 LYNP07948 512 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ATXN1LP0C7T5 689 aaKnown RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 CCDC166P0CW27 439 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 RHOQP17081 205 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PAMP19021 973 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 HDCP19113 662 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 LEPRP48357 1165 aaKnown RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 POLD2P49005 469 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 GATMP50440 423 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PRKAA2P54646 552 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ARPP19P56211 112 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 C1QTNF8P60827 252 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 PFKPQ01813 784 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ZRSR2Q15696 482 aaKnown RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ZNF423Q2M1K9 1284 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 VARS2Q5ST30 1063 aaKnown RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 HECTD2Q5U5R9 776 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-225ENST00000640209 GK5Q6ZS86 529 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 LCA5Q86VQ0 697 aa9.42□□□□□ -0.9
NECAP1-225ENST00000640209 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms