RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 DCLRE1BQ9H816 532 aa15.23■□□□□ 0.03
TRIM3-215ENST00000639856 PRKAG2Q9UGJ0 569 aa15.23■□□□□ 0.03
TRIM3-215ENST00000639856 SLC2A6Q9UGQ3 507 aa15.23■□□□□ 0.03
TRIM3-215ENST00000639856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SPECC1L-ADORA2AF8WAN1 911 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 PHGDHO43175 533 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 DIAPH2O60879 1101 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 RAMP2O60895 175 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 LMNAP02545 664 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 COL6A2P12110 1019 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 GNAZP19086 355 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SAT1P21673 171 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 DNAJB1P25685 340 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 CHRNA4P43681 627 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 RPS24P62847 133 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SLC10A7Q0GE19 358 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 UBAP2LQ14157 1087 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 ARMC3Q5W041 872 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 KDELC2Q7Z4H8 507 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 TMEM151AQ8N4L1 468 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 OR52K2Q8NGK3 314 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 CLP1Q92989 425 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 IMP4Q96G21 291 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 TSNARE1Q96NA8 513 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SP110Q9HB58 689 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 TRPC7Q9HCX4 862 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 OXSMQ9NWU1 459 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 CPSF2Q9P2I0 782 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 ZFP37Q9Y6Q3 630 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 DOCK6Q96HP0 2047 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 BPTFQ12830 3046 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 CHD5Q8TDI0 1954 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 PDE4DIPQ5VU43 2346 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 MAGEC1O60732 1142 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 KLHL2O95198 593 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 HSPA4LO95757 839 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SYN1P17600 705 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 PGM1P36871 562 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SLC11A2P49281 568 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 MAXP61244 160 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 MPP1Q00013 466 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 THOC5Q13769 683 aaKnown RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 POLD3Q15054 466 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 PCSK7Q16549 785 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 SLC41A1Q8IVJ1 513 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 FBXO27Q8NI29 283 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 KLF16Q9BXK1 252 aaPredicted RBP15.22■□□□□ 0.03
TRIM3-215ENST00000639856 C1orf21Q9H246 121 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 IL21Q9HBE4 155 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 NT5MQ9NPB1 228 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 INSL6Q9Y581 213 aa15.22■□□□□ 0.03
TRIM3-215ENST00000639856 A0A0D9SEW6 157 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 TTC24A2A3L6 582 aaPredicted RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 CARNS1A5YM72 827 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 TK2O00142 265 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 F11P03951 625 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 SLC1A2P43004 574 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 SEPT6Q14141 434 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 KHDC1Q4VXA5 237 aaKnown RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 TXNDC8Q6A555 127 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 ZYG11AQ6WRX3 759 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 TMC7Q7Z402 723 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 SPRED2Q7Z698 418 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 C7orf61Q8IZ16 206 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 CENPLQ8N0S6 344 aaPredicted RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 ZNF781Q8N8C0 355 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 PLD4Q96BZ4 506 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 ZFRQ96KR1 1074 aaKnown RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 GATA5Q9BWX5 397 aaPredicted RBP15.21■□□□□ 0.03
TRIM3-215ENST00000639856 CDH19Q9H159 772 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 ATP13A1Q9HD20 1204 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 VPS45Q9NRW7 570 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 ACOT9Q9Y305 439 aa15.21■□□□□ 0.03
TRIM3-215ENST00000639856 FAM95CA0A1B0GW59 222 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 H3BNC9 293 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 NRG2O14511 850 aaPredicted RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 CXCL14O95715 111 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 SBK3P0C264 359 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 STMN1P16949 149 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 AVPR1AP37288 418 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ETFBP38117 255 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 RAP1GDS1P52306 607 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 PGGT1BP53609 377 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 RAB10P61026 200 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ZXDBP98169 803 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 SERINC3Q13530 473 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 KPNB1Q14974 876 aaKnown RBP15.2■□□□□ 0.02
TRIM3-215ENST00000639856 C5orf22Q49AR2 442 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 DNAL1Q4LDG9 190 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 LIPMQ5VYY2 423 aa15.2■□□□□ 0.02
TRIM3-215ENST00000639856 ZNF470Q6ECI4 717 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms