RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 FAM9CQ8IZT9 166 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 TBC1D19Q8N5T2 526 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 NIPA2Q8N8Q9 360 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 SCAMP5Q8TAC9 235 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ITFG1Q8TB96 612 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 OSCP1Q8WVF1 389 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CAPN10Q9HC96 672 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ZNF180Q9UJW8 692 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 PCDHB12Q9Y5F1 795 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 KNL1Q8NG31 2342 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 HNRNPCL2B2RXH8 293 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 KDM1AO60341 852 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 S100A3P33764 101 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 LIMK2P53671 638 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 INHBEP58166 350 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 DSC2Q02487 901 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 TRIM60Q495X7 471 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 RINLQ6ZS11 566 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 OR4L1Q8NH43 312 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 GRIN3AQ8TCU5 1115 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 SELENOMQ8WWX9 145 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 SPATA16Q9BXB7 569 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CADM1Q9BY67 442 aaKnown RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 FAM126AQ9BYI3 521 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 C9JVG2 144 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 AZIN1O14977 448 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ITGA7Q13683 1181 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ZNF460Q14592 562 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 RFWD3Q6PCD5 774 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 DLG3Q92796 817 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 EBF4Q9BQW3 602 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 TEKT2Q9UIF3 430 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 SIX4Q9UIU6 781 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 C1orf232A0A0U1RR37 186 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 ASGR1P07306 291 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CKBP12277 381 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 LPOP22079 712 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CHI3L1P36222 383 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CHRNA4P43681 627 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 PCYT1AP49585 367 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 AIF1P55008 147 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CCDC15Q0P6D6 951 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 PDK3Q15120 406 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 INSCQ1MX18 579 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 GK5Q6ZS86 529 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CUZD1Q86UP6 607 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 CLYBLQ8N0X4 340 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 RSPH1Q8WYR4 309 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 DTNBP1Q96EV8 351 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 UROC1Q96N76 676 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 NR1H4Q96RI1 486 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 SPAG4Q9NPE6 437 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 TMEM39AQ9NV64 488 aa14.51□□□□□ -0.09
SCARB2-216ENST00000639300 AGO1Q9UL18 857 aaKnown RBP14.51□□□□□ -0.09
SCARB2-216ENST00000639300 HS6ST1O60243 411 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TM7SF2O76062 418 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 RFX3P48380 749 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 NOVP48745 357 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ALDH9A1P49189 494 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 PPIDQ08752 370 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 GPR158Q5T848 1215 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 DET1Q7L5Y6 550 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ZNF781Q8N8C0 355 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 OR4K2Q8NGD2 314 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TRAPPC9Q96Q05 1148 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 STN1Q9H668 368 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 MYH6P13533 1939 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TBL1XO60907 577 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TYMPP19971 482 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 SERPINA4P29622 427 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 PSEN1P49768 467 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 CPSF6Q16630 551 aaKnown RBP eCLIP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TJAP1Q5JTD0 557 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ARHGAP17Q68EM7 881 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ZNF467Q7Z7K2 595 aaPredicted RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ZDHHC13Q8IUH4 622 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 CD101Q93033 1021 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 RPL26L1Q9UNX3 145 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 GLTPD2A6NH11 291 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 ARL5CA6NH57 179 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 MGRN1O60291 552 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 RGS20O76081 388 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TGDSO95455 350 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 OR56A5P0C7T3 313 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 GPX6P59796 221 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 SP3Q02447 781 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 IRF8Q02556 426 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 CSTF3Q12996 717 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 SQLEQ14534 574 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TIGD2Q4W5G0 525 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 INTS6LQ5JSJ4 861 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 UTP15Q8TED0 518 aaKnown RBP14.5□□□□□ -0.09
SCARB2-216ENST00000639300 GLMNQ92990 594 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 TEPSINQ96N21 525 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 PANX3Q96QZ0 392 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 LNPEPQ9UIQ6 1025 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 INVSQ9Y283 1065 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 DYRK1BQ9Y463 629 aa14.5□□□□□ -0.09
SCARB2-216ENST00000639300 CAPN8A6NHC0 703 aa14.49□□□□□ -0.09
SCARB2-216ENST00000639300 FZD9O00144 591 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms