RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ANKRD34CP0C6C1 535 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 PYGMP11217 842 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 GLRA2P23416 452 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ANXA13P27216 316 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 GSTT1P30711 240 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CHRNB4P30926 498 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CHRNA3P32297 505 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 RPS15P62841 145 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 GPLD1P80108 840 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ARHGEF7Q14155 803 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 IL11RAQ14626 422 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 SEC23AQ15436 765 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ZBTB6Q15916 424 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 UBE2SQ16763 222 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 RTN1Q16799 776 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TDRD10Q5VZ19 366 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM71Q6P5X7 295 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 PCGF5Q86SE9 256 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ADGRG6Q86SQ4 1221 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CD302Q8IX05 232 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 UNC5BQ8IZJ1 945 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM86AQ8N2M4 240 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 FER1L6-AS2Q96M78 137 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ZMAT2Q96NC0 199 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 WWC2-AS2Q96NR7 200 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 PKMYT1Q99640 499 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ARPC5LQ9BPX5 153 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 LRRC61Q9BV99 259 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 GSX2Q9BZM3 304 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CXCL16Q9H2A7 254 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 UNC45AQ9H3U1 944 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 OSBPL3Q9H4L5 887 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CAAP1Q9H8G2 361 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ETNK1Q9HBU6 452 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ACTR10Q9NZ32 417 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 IPO11Q9UI26 975 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 KLHL21Q9UJP4 597 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 GPR34Q9UPC5 381 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 DERAQ9Y315 318 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 KNL1Q8NG31 2342 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 KATNA1O75449 491 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 LYPLA2O95372 231 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CNOT4O95628 575 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 PTGIRP43119 386 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 SMTNP53814 917 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ST8SIA6P61647 398 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 EIF2B5Q13144 721 aaKnown RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TM4SF20Q53R12 229 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 KIAA1161Q6NSJ0 714 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TMEM135Q86UB9 458 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 C17orf82Q86X59 251 aaPredicted RBP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 RAB43Q86YS6 212 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 FAM217AQ8IXS0 508 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 FAM9BQ8IZU0 186 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 MYO1HQ8N1T3 1032 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC7-213ENST00000639290 AADATQ8N5Z0 425 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ASAP3Q8TDY4 903 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 MFSD3Q96ES6 412 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 SIGLEC12Q96PQ1 595 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 CIPCQ9C0C6 399 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ACTL8Q9H568 366 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 PLEKHF2Q9H8W4 249 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ST7Q9NRC1 585 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 ANKEF1Q9NU02 776 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 SMPD4Q9NXE4 827 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TRPM6Q9BX84 2022 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
CCDC7-213ENST00000639290 MAP1AP78559 2803 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-213ENST00000639290 SLC35F4A4IF30 521 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 A6NHS1 94 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 C3orf84H3BNL1 204 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 POLR1CO15160 346 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-213ENST00000639290 TMPRSS2O15393 492 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 COCHO43405 550 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 NRDCO43847 1150 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 SLC19A2O60779 497 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 TNFRSF21O75509 655 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 PSMD10O75832 226 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 RASGRP1O95267 797 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 SCGB1D2O95969 90 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 CHGBP05060 677 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 TPOP07202 933 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 ZDHHC11BP0C7U3 371 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 LIG1P18858 919 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 KCNK10P57789 538 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 LILRA4P59901 499 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 RELBQ01201 579 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 ETFDHQ16134 617 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 ZNF284Q2VY69 593 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 KRTCAP3Q53RY4 240 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 CT47A1Q5JQC4 288 aaPredicted RBP3.53□□□□□ -1.84
CCDC7-213ENST00000639290 LRCH2Q5VUJ6 765 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 MACC1Q6ZN28 852 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 LRRTM3Q86VH5 581 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 CACUL1Q86Y37 369 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 THNSL2Q86YJ6 484 aa3.53□□□□□ -1.84
CCDC7-213ENST00000639290 SNX29Q8TEQ0 813 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms