RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TEX51A0A1B0GUA7 166 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 DHRS12A0PJE2 317 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ZW10O43264 779 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 B4GALT4O60513 344 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 JUNP05412 331 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 HTR1BP28222 390 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 RPS9P46781 194 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 AP2S1P53680 142 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 STILQ15468 1287 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 LCN8Q6JVE9 175 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF544Q6NX49 715 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 OFCC1Q8IZS5 231 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 SVOPQ8N4V2 548 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 VPS35Q96QK1 796 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 NAT9Q9BTE0 207 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ATP13A2Q9NQ11 1180 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 GAS2O43903 313 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 TMCC2O75069 709 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 NDST3O95803 873 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 GPIP06744 558 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 NAT2P11245 290 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 CRHBPP24387 322 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF135P52742 658 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 TNFAIP2Q03169 654 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 GALNT3Q14435 633 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 NDUFAF5Q5TEU4 345 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 SNX29P2Q8IUI4 249 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 PELI3Q8N2H9 469 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 BEND7Q8N7W2 519 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 OR7A2PQ8NGA2 310 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 MYRFLQ96LU7 910 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 COQ7Q99807 217 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 GATA5Q9BWX5 397 aaPredicted RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
CAPN3-221ENST00000638141 INTS10Q9NVR2 710 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
CAPN3-221ENST00000638141 AP3B1O00203 1094 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 RAD51BO15315 384 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 MYL3P08590 195 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 PSMA4P25789 261 aaKnown RBP12.09□□□□□ -0.47
CAPN3-221ENST00000638141 AXLP30530 894 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-221ENST00000638141 TGFB2P61812 414 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 BNIP2Q12982 314 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 SMU1Q2TAY7 513 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 PAGE2BQ5JRK9 111 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 BRMS1LQ5PSV4 323 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 REP15Q6BDI9 236 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 SLC39A4Q6P5W5 647 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 CLEC14AQ86T13 490 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 C4orf19Q8IY42 314 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 FAM109AQ8N4B1 249 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 OR13J1Q8NGT2 312 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 ASB2Q96Q27 587 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 APBA2Q99767 749 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 C2orf49Q9BVC5 232 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-221ENST00000638141 TM9SF3Q9HD45 589 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 OXSMQ9NWU1 459 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 OAZ3Q9UMX2 235 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
CAPN3-221ENST00000638141 KCNU1A8MYU2 1149 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF487B1APH4 448 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 H7C0C1 242 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 EI24O14681 340 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 MPOP05164 745 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TFEBP19484 476 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 ATP6V1B2P21281 511 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 ATP2B4P23634 1241 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 IL32P24001 234 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 EEF1B2P24534 225 aaKnown RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 MPSTP25325 297 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 IL1R2P27930 398 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 RBL1P28749 1068 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 DDOSTP39656 456 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 ATP5OP48047 213 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TARDBPQ13148 414 aaKnown RBP eCLIP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 GRAPQ13588 217 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 KIZQ2M2Z5 673 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 GLRA4Q5JXX5 417 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TREML2Q5T2D2 321 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 TDRD10Q5VZ19 366 aaKnown RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 NEK5Q6P3R8 708 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 CYP2R1Q6VVX0 501 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 CHST15Q7LFX5 561 aaPredicted RBP12.08□□□□□ -0.47
CAPN3-221ENST00000638141 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.47
CAPN3-221ENST00000638141 DDIASQ8IXT1 998 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms