RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	ACADSB	P45954	432 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CSE1L	P55060	971 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FOXA1	P55317	472 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PPP1R8	Q12972	351 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	DCTN2	Q13561	401 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TBCEL	Q5QJ74	424 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TTC33	Q6PID6	262 aa	Predicted RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	HSFY1	Q96LI6	401 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NSUN5	Q96P11	429 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CCDC28B	Q9BUN5	200 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	MUC3B	Q9H195	1237 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	MRPL46	Q9H2W6	279 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PRDM16	Q9HAZ2	1276 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CRTAC1	Q9NQ79	661 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	MYRF	Q9Y2G1	1151 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033		H3BMM5	538 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	HTRA2	O43464	458 aa	Predicted RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	RPS12	P25398	132 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	OXTR	P30559	389 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SLC5A3	P53794	718 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PRKCQ	Q04759	706 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	LPIN1	Q14693	890 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FAM187B	Q17R55	369 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	RETREG3	Q86VR2	466 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	UNC93A	Q86WB7	457 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CHERP	Q8IWX8	916 aa	Known RBP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	VPS33A	Q96AX1	596 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TNIP3	Q96KP6	325 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	B3GALT6	Q96L58	329 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	GPR78	Q96P69	363 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SMO	Q99835	787 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	ZNF696	Q9H7X3	374 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NDUFA13	Q9P0J0	144 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FBXO5	Q9UKT4	447 aa		13.13	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PDE4DIP	Q5VU43	2346 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	DAB1	O75553	588 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PRSS56	P0CW18	603 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SLC26A2	P50443	739 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CCNA1	P78396	465 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	BTBD8	Q5XKL5	378 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FASTKD5	Q7L8L6	764 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	DHFR2	Q86XF0	187 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CRYBG2	Q8N1P7	616 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	HDAC11	Q96DB2	347 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	ASB9	Q96DX5	294 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TBL1Y	Q9BQ87	522 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PAIP1	Q9H074	479 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	THEG	Q9P2T0	379 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	UBQLN1	Q9UMX0	589 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	POLR2A	P24928	1970 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SSC5D	A1L4H1	1573 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033		A8MT66	165 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	XPOT	O43592	962 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	LINC00032	P0C843	101 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CYP2C9	P11712	490 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CPB1	P15086	417 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FUT4	P22083	530 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	EMP3	P54852	163 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	APOF	Q13790	326 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	LDLRAP1	Q5SW96	308 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SDHAF4	Q5VUM1	108 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NAPEPLD	Q6IQ20	393 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TAPT1	Q6NXT6	567 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PKN3	Q6P5Z2	889 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NOTUM	Q6P988	496 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PDZD4	Q76G19	769 aa	Predicted RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PABPC5	Q96DU9	382 aa	Known RBP	13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	ARMC7	Q9H6L4	198 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	LTB4R2	Q9NPC1	389 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SPAG4	Q9NPE6	437 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CROT	Q9UKG9	612 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033	TIMM22	Q9Y584	194 aa		13.12	□□□□□ -0.31
CHRNA7-223	ENST00000637033		A0A1B0GTL3	188 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	GIPC1	O14908	333 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	INPP4B	O15327	924 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	AP1G1	O43747	822 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SNRPB2	P08579	225 aa	Known RBP	13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PCNA	P12004	261 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NAB1	Q13506	487 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	GRB7	Q14451	532 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	ZBTB6	Q15916	424 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	KLC3	Q6P597	504 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	POTEH	Q6S545	545 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PARP8	Q8N3A8	854 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	FIBCD1	Q8N539	461 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	SMOX	Q9NWM0	555 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	BCAP29	Q9UHQ4	241 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	MKI67	P46013	3256 aa	Known RBP	13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033		A0A1W2PPW3	197 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033		J3QRK9	145 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	PIR	O00625	290 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NRP2	O60462	931 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	ATP6V1G1	O75348	118 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	BAIAP3	O94812	1187 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	EEF1B2	P24534	225 aa	Known RBP	13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	CD151	P48509	253 aa		13.11	□□□□□ -0.31
CHRNA7-223	ENST00000637033	NAA20	P61599	178 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms