RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ADH6P28332 368 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 RBL1P28749 1068 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SERPINA4P29622 427 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 IL12RB1P42701 662 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TNNT3P45378 269 aaPredicted RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 GEMP55040 296 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 WASHC5Q12768 1159 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ZBTB17Q13105 803 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 MPP3Q13368 585 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PTK6Q13882 451 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PRPSAP1Q14558 356 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 DLG2Q15700 870 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PARP6Q2NL67 630 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TTC31Q49AM3 519 aaPredicted RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 C4orf17Q53FE4 359 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 CARD16Q5EG05 197 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 EGFLAMQ63HQ2 1017 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF776Q68DI1 518 aaPredicted RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 BRAT1Q6PJG6 821 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PCGF5Q86SE9 256 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 KBTBD6Q86V97 674 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 HOOK3Q86VS8 718 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 NDUFAF2Q8N183 169 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 MMGT1Q8N4V1 131 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 BBOF1Q8ND07 529 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TMIEQ8NEW7 156 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 OR2T3Q8NH03 318 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PRUNE2Q8WUY3 3088 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 EZH1Q92800 747 aaPredicted RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 HEPHQ9BQS7 1158 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 TMEM121Q9BTD3 319 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 RAB17Q9H0T7 212 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SLC25A51Q9H1U9 297 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF106Q9H2Y7 1883 aaKnown RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 KDM4CQ9H3R0 1056 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 ATP13A3Q9H7F0 1226 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 USP29Q9HBJ7 922 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 RBM22Q9NW64 420 aaKnown RBP eCLIP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 DKK3Q9UBP4 350 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 NDRG2Q9UN36 371 aaKnown RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 R3HDM2Q9Y2K5 976 aaKnown RBP6.8□□□□□ -1.32
UPF3B-205ENST00000636792 SIT1Q9Y3P8 196 aa6.8□□□□□ -1.32
UPF3B-205ENST00000636792 C5orf42Q9H799 3197 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 COL6A3P12111 3177 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 TMEM221A6NGB7 291 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 M0R296 226 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 KCNK1O00180 336 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 INSIG1O15503 277 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 HTRA2O43464 458 aaPredicted RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF217O75362 1048 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 IGLV3-19P01714 112 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 HLA-DQB2P05538 268 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 EPHX1P07099 455 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 HLA-DPA1P20036 260 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 C5AR1P21730 350 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 GLDCP23378 1020 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 MAGEA6P43360 314 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 GRIA4P48058 902 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 STK19P49842 368 aaPredicted RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 CCNHP51946 323 aaPredicted RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 POLR2LP62875 67 aaKnown RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 DR1Q01658 176 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 SLC10A7Q0GE19 358 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 MESP2Q0VG99 397 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 FZD5Q13467 585 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 SEMA5AQ13591 1074 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 LAMB3Q13751 1172 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 CRY1Q16526 586 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 TMEM259Q4ZIN3 620 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ANKRD20A2Q5SQ80 823 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ANKRD20A1Q5TYW2 823 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ANKRD20A3Q5VUR7 823 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 NAPEPLDQ6IQ20 393 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 C8orf74Q6P047 294 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 PPP1R21Q6ZMI0 780 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ARHGAP36Q6ZRI8 547 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ARHGEF18Q6ZSZ5 1173 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 CEP128Q6ZU80 1094 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 GSTA5Q7RTV2 222 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 PID1Q7Z2X4 250 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 LINC00523Q86TU6 105 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 C11orf74Q86VG3 221 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ZNF567Q8N184 647 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 EIF1ADQ8N9N8 165 aaKnown RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ST13P5Q8NFI4 369 aaPredicted RBP6.79□□□□□ -1.32
UPF3B-205ENST00000636792 OR2A12Q8NGT7 310 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 RPLP0P6Q8NHW5 317 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 TTC8Q8TAM2 541 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 C1orf54Q8WWF1 131 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ATG4AQ8WYN0 398 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 PTPRN2Q92932 1015 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 FAM131CQ96AQ9 280 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 TADA1Q96BN2 335 aa6.79□□□□□ -1.32
UPF3B-205ENST00000636792 ECHDC3Q96DC8 303 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms