RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SMARCD1Q96GM5 515 aa14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 C3orf30Q96M34 536 aa14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 KCNA7Q96RP8 456 aa14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 FAM105AQ9NUU6 356 aa14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 C6orf203Q9P0P8 240 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 MARCH4Q9P2E8 410 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-228ENST00000636610 C17orf102A2RUQ5 167 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 A8MT66 165 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PSMD12O00232 456 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PLOD2O00469 737 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 FBP2O00757 339 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 CLIC3O95833 236 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PABPC4LP0CB38 370 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 GPR15P49685 360 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ECT2LQ008S8 904 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 DSC2Q02487 901 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 OR10T2Q8NGX3 314 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 SPPL2BQ8TCT7 592 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 HIC2Q96JB3 615 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 TCAF1Q9Y4C2 921 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ACTL7AQ9Y615 435 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 BRCA1P38398 1863 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 RBM47A0AV96 593 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 NCF1BA6NI72 391 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ERI2A8K979 691 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 NCF1CA8MVU1 366 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PDLIM1O00151 329 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 TSPAN3O60637 253 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 TADA2AO75478 443 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 SOAT2O75908 522 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 NCF1P14598 390 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 SLC7A2P52569 658 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 IQSEC1Q6DN90 963 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 APLFQ8IW19 511 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 HDAC10Q969S8 669 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ESAMQ96AP7 390 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 MRGPRX2Q96LB1 330 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 CYP2S1Q96SQ9 504 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 RTP3Q9BQQ7 232 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 FAM124BQ9H5Z6 455 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 VCX3AQ9NNX9 186 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 IPO11Q9UI26 975 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 BTRCQ9Y297 605 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 AP4S1Q9Y587 144 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PCDHGA7Q9Y5G6 932 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 PLXNA1Q9UIW2 1896 aa14.13□□□□□ -0.15
CACNA1A-228ENST00000636610 SBF1O95248 1867 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 A0A0U1RQS6 177 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MBLAC1A4D2B0 266 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 UBFD1O14562 309 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CASQ2O14958 399 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 VILLO15195 856 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 HNRNPRO43390 633 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 AKAP10O43572 662 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 STRNO43815 780 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CCR1P32246 355 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 GRIA3P42263 894 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 RANBP1P43487 201 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 LINC00523Q86TU6 105 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 DDIASQ8IXT1 998 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 NSUN5Q96P11 429 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 SMIM14Q96QK8 99 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 SLC9A7Q96T83 725 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 PTPN18Q99952 460 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MCMBPQ9BTE3 642 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 NMUR1Q9HB89 426 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 PRPF19Q9UMS4 504 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 NR5A2O00482 541 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MTSS1O43312 755 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CNTN5O94779 1100 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 HAPLN1P10915 354 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 PRDX6P30041 224 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 ARPP19P56211 112 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 PLIN5Q00G26 463 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 SCAPQ12770 1279 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 IHHQ14623 411 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 DDR2Q16832 855 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MGAT5BQ3V5L5 792 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 VPS26BQ4G0F5 336 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 REP15Q6BDI9 236 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 BLOC1S5Q8TDH9 187 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 AGO3Q9H9G7 860 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 IGSF5Q9NSI5 407 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MID2Q9UJV3 735 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 LOC285556D6RIA3 1793 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 ACOT8O14734 319 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 MRASO14807 208 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 APOA4P06727 396 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 FAM58BPP0C7Q3 252 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 LHX1P48742 406 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CRYBB1P53674 252 aaPredicted RBP14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 INHBCP55103 352 aa14.12□□□□□ -0.15
CACNA1A-228ENST00000636610 CDKN2DP55273 166 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms