RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MAD2L1Q13257 205 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 C4orf22Q6V702 233 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 MANFP55145 182 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 LRIG3Q6UXM1 1119 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 FAM183BPQ6ZVS7 135 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC38A3Q99624 504 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 CACNG4Q9UBN1 327 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 OR12D3Q9UGF7 316 aa17.95■□□□□ 0.46
CACNA1A-227ENST00000636549 TTC34A8MYJ7 566 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 TAF4O00268 1085 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 KHNYNO15037 678 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 NKRFO15226 690 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 RIPK2O43353 540 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 TNFSF9P41273 254 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 KCNT2Q6UVM3 1135 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 KRT74Q7RTS7 529 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 KLHL32Q96NJ5 620 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 PSME2Q9UL46 239 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 WNT10BO00744 389 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 MRASO14807 208 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 NFATC2Q13469 925 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 IL12BP29460 328 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 CLVS1Q8IUQ0 354 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 HMGB4Q8WW32 186 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 FAIM2Q9BWQ8 316 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 GGA2Q9UJY4 613 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 U3KQV3 271 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SLURP2P0DP57 97 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC7A2P52569 658 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 ANTXR2P58335 489 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 MGAT5Q09328 741 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SNX32Q86XE0 403 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 ACP6Q9NPH0 428 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 ANKRD63C9JTQ0 380 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 TM9SF1O15321 606 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 APOL4Q9BPW4 351 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 KCNF1Q9H3M0 494 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 GOLGA2P5Q9HBQ8 144 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 SGK2Q9HBY8 427 aa17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1A-227ENST00000636549 ATP9AO75110 1047 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ADH1CP00326 375 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SERPINA1P01009 418 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 DBTP11182 482 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC12A3P55017 1021 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 TGFB2P61812 414 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 MBTD1Q05BQ5 628 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 C9orf64Q5T6V5 341 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 OR2L3Q8NG85 312 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ISCUQ9H1K1 167 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 IKZF3Q9UKT9 509 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 PPP1R3GB7ZBB8 358 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SMAPO00193 183 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 RLN1P04808 185 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 DGLUCYQ7Z3D6 616 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CLIP4Q8N3C7 705 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 PIGUQ9H490 435 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 POPDC2Q9HBU9 364 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ST3GAL5Q9UNP4 418 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SF3B1O75533 1304 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SGTAO43765 313 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 PGAM1P18669 254 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 C2orf27AQ580R0 203 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 UBR7Q8N806 425 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ANKS1AQ92625 1134 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 MAGEB18Q96M61 343 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CDRT15Q96T59 188 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CEP44Q9C0F1 390 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SEMA6BQ9H3T3 888 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 VPS4AQ9UN37 437 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SAP18O00422 153 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ASNA1O43681 348 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CDC40O60508 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CSN2P05814 226 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 BMP7P18075 431 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CBX5P45973 191 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 B3GALT6Q96L58 329 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ADAM7Q9H2U9 754 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 BRD7Q9NPI1 651 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 GPR75-ASB3A0A0A6YYF3 556 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 QSOX1O00391 747 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 BCL10O95999 233 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 SAGP10523 405 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 BCAP31P51572 246 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 RAD23AP54725 363 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 AGBL2Q5U5Z8 902 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 GDF6Q6KF10 455 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 RBM43Q6ZSC3 357 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CHST15Q7LFX5 561 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 GPR142Q7Z601 462 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms