RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 BTBD9Q96Q07 612 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 SEMA3CQ99985 751 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 CLPBQ9H078 707 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 CD248Q9HCU0 757 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 SAGE1Q9NXZ1 904 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 SOBPA7XYQ1 873 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 CLGNO14967 610 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ALOX15P16050 662 aaPredicted RBP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ESRRGP62508 458 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ZBTB17Q13105 803 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 PTK2BQ14289 1009 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 CERCAMQ5T4B2 595 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 PAQR9Q6ZVX9 377 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 C10orf107Q8IVU9 208 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ULK4Q96C45 1275 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 APOL2Q9BQE5 337 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 GATA5Q9BWX5 397 aaPredicted RBP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 GPR63Q9BZJ6 419 aa4.59□□□□□ -1.68
SCN1A-210ENST00000635776 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.59□□□□□ -1.68
SCN1A-210ENST00000635776 ZCWPW2A0A1B0GU75 182 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF197O14709 1029 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CACNG3O60359 315 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TPH1P17752 444 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CA8P35219 290 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KLF10Q13118 480 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TAF1AQ15573 450 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 INO80DQ53TQ3 878 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ARMC12Q5T9G4 340 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DLK2Q6UY11 383 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SPATA19Q7Z5L4 167 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PGAM4Q8N0Y7 254 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GOLM1Q8NBJ4 401 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ZMIZ2Q8NF64 920 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MFSD3Q96ES6 412 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ATXN7L3BQ96GX2 97 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF184Q99676 751 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DRGXA6NNA5 263 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TRIM38O00635 465 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KATNA1O75449 491 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CHRNA1P02708 482 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RPSAP08865 295 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ENO3P13929 434 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SERPINA4P29622 427 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 NUDT2P50583 147 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 SULT2A1Q06520 285 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 DYNC1I2Q13409 638 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MTM1Q13496 603 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CNGA3Q16281 694 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RAP1GAP2Q684P5 730 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CYP4V2Q6ZWL3 525 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TTC30BQ8N4P2 665 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 C2CD4AQ8NCU7 369 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PHC3Q8NDX5 983 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TIFAQ96CG3 184 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TRIB3Q96RU7 358 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CFHR5Q9BXR6 569 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 HS3ST4Q9Y661 456 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RAD51BO15315 384 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PRAMEF11O60813 436 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CD86P42081 329 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ACADVLP49748 655 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 EPS8Q12929 822 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GRAMD1BQ3KR37 738 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PTRHD1Q6GMV3 140 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 LRRC74BQ6ZQY2 392 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 HFE2Q6ZVN8 426 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TAS2R42Q7RTR8 314 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RYBPQ8N488 228 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RFWD2Q8NHY2 731 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RHEBL1Q8TAI7 183 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KLHL4Q9C0H6 718 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ARL8BQ9NVJ2 186 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KCTD5Q9NXV2 234 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TMEM216Q9P0N5 145 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CROTQ9UKG9 612 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 AGO1Q9UL18 857 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RNF112Q9ULX5 631 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 EIF3LQ9Y262 564 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 ABHD14A-ACY1A0A1B0GW23 586 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PEX1O43933 1283 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MYO1DO94832 1006 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CKBP12277 381 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 PTGER3P43115 390 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 RANBP10Q6VN20 620 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 IGDCC3Q8IVU1 814 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 COLGALT2Q8IYK4 626 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TCAIMQ8N3R3 496 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 GPR150Q8NGU9 434 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 COG4Q9H9E3 785 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 MRPL17Q9NRX2 175 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 VPS28Q9UK41 221 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CXorf49A8MYA2 514 aaPredicted RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CD3EAPO15446 510 aaKnown RBP4.58□□□□□ -1.68
SCN1A-210ENST00000635776 CFLARO15519 480 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 USP12O75317 370 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 IGLV3-25P01717 112 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 IDO1P14902 403 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 TNK2Q07912 1038 aa4.58□□□□□ -1.68
SCN1A-210ENST00000635776 KCTD11Q693B1 232 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms