RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	UBXN1	Q04323	297 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	ELP6	Q0PNE2	266 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	PARP15	Q460N3	678 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	PRRT3	Q5FWE3	981 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	FAXC	Q5TGI0	409 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	WDR59	Q6PJI9	974 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	PHF13	Q86YI8	300 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	CENPI	Q92674	756 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	HMCES	Q96FZ2	354 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	POM121	Q96HA1	1249 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	NAF1	Q96HR8	494 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	EXOC2	Q96KP1	924 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	GBP4	Q96PP9	640 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	KLF6	Q99612	283 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	WRAP53	Q9BUR4	548 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	SLC6A16	Q9GZN6	736 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	CAAP1	Q9H8G2	361 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	ANO10	Q9NW15	660 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	DONSON	Q9NYP3	566 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	SIK3	Q9Y2K2	1263 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	SETX	Q7Z333	2677 aa	Known RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	SIGLEC16	A6NMB1	481 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	RASA4B	C9J798	803 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	GOLGA6L22	H0YM25	854 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	MUSK	O15146	869 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	RASA4	O43374	803 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	MMP20	O60882	483 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	ANXA6	P08133	673 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	IGFALS	P35858	605 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	BLK	P51451	505 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	SUOX	P51687	545 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	TPI1	P60174	286 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	YPEL5	P62699	121 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	CXADR	P78310	365 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PTP4A2	Q12974	167 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	STX1A	Q16623	288 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	KLHL40	Q2TBA0	621 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	INO80D	Q53TQ3	878 aa	Predicted RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	C3orf38	Q5JPI3	329 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	CDCP2	Q5VXM1	449 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	ESRP1	Q6NXG1	681 aa	Known RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	ERAP2	Q6P179	960 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	GUSBP11	Q6P575	273 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	CRTC1	Q6UUV9	634 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	MACC1	Q6ZN28	852 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	RBM44	Q6ZP01	1051 aa	Known RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	MON1B	Q7L1V2	547 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	GPR155	Q7Z3F1	870 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	SPACA3	Q8IXA5	215 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PHACTR4	Q8IZ21	702 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	RBFA	Q8N0V3	343 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PYROXD2	Q8N2H3	581 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	SCG3	Q8WXD2	468 aa	Known RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	NAT6	Q93015	286 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	ZNF578	Q96N58	590 aa	Predicted RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PCDHB18P	Q96TA0	734 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	AGPAT1	Q99943	283 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	CNPY3	Q9BT09	278 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	MAGEB5	Q9BZ81	275 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PRORY	Q9H606	182 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	POLR1B	Q9H9Y6	1135 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	THSD1	Q9NS62	852 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	UBA2	Q9UBT2	640 aa	Predicted RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	LIMA1	Q9UHB6	759 aa	Known RBP	10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	SALL4	Q9UJQ4	1053 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	TENM4	Q6N022	2769 aa		10.48	□□□□□ -0.73
UBE3A-223	ENST00000631247	PTPRQ	Q9UMZ3	2332 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	SHROOM3	Q8TF72	1996 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	TOR1B	O14657	336 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	TPP1	O14773	563 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	AREL1	O15033	823 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	SPINT1	O43278	529 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	DAPK3	O43293	454 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	PIGN	O95427	931 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	CTSE	P14091	401 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	CD46	P15529	392 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	FER	P16591	822 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	HTR1B	P28222	390 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	RBMS1	P29558	406 aa	Known RBP	10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	EIF4A3	P38919	411 aa	Known RBP	10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	LSS	P48449	732 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	UCN	P55089	124 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	ADK	P55263	362 aa	Known RBP	10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	TMPRSS3	P57727	454 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	PPARD	Q03181	441 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	TLE3	Q04726	772 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	C19orf57	Q0VDD7	668 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	EIF2B5	Q13144	721 aa	Known RBP	10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	SERINC3	Q13530	473 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	C1orf61	Q13536	156 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	GRM3	Q14832	879 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	LRRC14	Q15048	493 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	IRF4	Q15306	451 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	ISX	Q2M1V0	245 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	TPRG1L	Q5T0D9	272 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	PPP1R2P3	Q6NXS1	205 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	FOXR1	Q6PIV2	292 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	DNAAF5	Q86Y56	855 aa		10.47	□□□□□ -0.73
UBE3A-223	ENST00000631247	NETO2	Q8NC67	525 aa		10.47	□□□□□ -0.73

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