RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SLC16A3O15427 465 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GUCY1B2O75343 617 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CIB2O75838 187 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 APEHP13798 732 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ITIH2P19823 946 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 MAGEA10P43363 369 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PHKA2P46019 1235 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 STAT2P52630 851 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SMSP52788 366 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ALDH18A1P54886 795 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PRMT2P55345 433 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ETF1P62495 437 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PLAURQ03405 335 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TMEM115Q12893 351 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SLC13A2Q13183 592 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PPIL2Q13356 520 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF177Q13360 481 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GALNTL6Q49A17 601 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FASTKD1Q53R41 847 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SGO1Q5FBB7 561 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CFAP157Q5JU67 520 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CPZQ66K79 652 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PLA2G4FQ68DD2 849 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NHLRC1Q6VVB1 395 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PRR23CQ6ZRP0 262 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ESPNLQ6ZVH7 1005 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SRRM1Q8IYB3 904 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SYCE1Q8N0S2 351 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TRPV1Q8NER1 839 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 OR6B3Q8NGW1 331 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 EDAQ92838 391 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SHISA4Q96DD7 197 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 C5orf30Q96GV9 206 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 RBM41Q96IZ5 413 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NECTIN4Q96NY8 510 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 OR1F2PQ96R84 312 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PANX2Q96RD6 677 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 JPH2Q9BR39 696 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 BTBD2Q9BX70 525 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TINAGL1Q9GZM7 467 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SLC26A1Q9H2B4 701 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 IKZF4Q9H2S9 585 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 UPF2Q9HAU5 1272 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ARL8BQ9NVJ2 186 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SEC63Q9UGP8 760 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 MINPP1Q9UNW1 487 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PLEKHA6Q9Y2H5 1048 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PMF1-BGLAPU3KQ54 211 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CHD2O14647 1828 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ELOVL7A1L3X0 281 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PYCARD-AS1I3L0S3 204 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 BTN3A1O00481 513 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CLDN3O15551 220 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ADAM11O75078 769 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ECI2O75521 394 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PCDH8O95206 1070 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 RETP07949 1114 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 UQCRFS1P1P0C7P4 283 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CLUP10909 449 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 POU2F1P14859 743 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 DDX5P17844 614 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PFKLP17858 780 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GABRB1P18505 474 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CALB2P22676 271 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CD27P26842 260 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GUCY1A2P33402 732 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TRIM23P36406 574 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GABRB2P47870 512 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 KCNJ1P48048 391 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SNU13P55769 128 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 COPS2P61201 443 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SP2Q02086 613 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NADK2Q4G0N4 442 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NKAIN1Q4KMZ8 207 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 BCL7AQ4VC05 210 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GPAT3Q53EU6 434 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NDUFAF5Q5TEU4 345 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 LIPMQ5VYY2 423 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 E4F1Q66K89 784 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SASS6Q6UVJ0 657 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 MTSS1LQ765P7 747 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TRAPPC11Q7Z392 1133 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FAM124AQ86V42 546 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 LDHDQ86WU2 507 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF573Q86YE8 665 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 IQUBQ8NA54 791 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CYB5D2Q8WUJ1 264 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PIBF1Q8WXW3 757 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 RAB24Q969Q5 203 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FAM149B1Q96BN6 582 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF775Q96BV0 537 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 PPP1R14BQ96C90 147 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FBXL20Q96IG2 436 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 MRGPRX4Q96LA9 322 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 WDFY2Q96P53 400 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 FERMT1Q9BQL6 677 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 C9orf16Q9BUW7 83 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms