RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HES6Q96HZ4 224 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 XYLT2Q9H1B5 865 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 FBXO44Q9H4M3 255 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TTC7AQ9ULT0 858 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 BTBD3Q9Y2F9 522 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ELOA3CA0A087WX78 387 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 A0A1B0GTW7 788 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TRABD2BA6NFA1 517 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ELOA3DA6NLF2 546 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 MAPK13O15264 365 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PMM2O15305 246 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DEAF1O75398 565 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TMEM253P0C7T8 217 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TRIM49P0CI25 452 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TRIM49CP0CI26 452 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ADH6P28332 368 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CORO1AP31146 461 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HOXD12P35452 270 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HSPA9P38646 679 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DPP6P42658 865 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 GCLMP48507 274 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TPMTP51580 245 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HADHBP55084 474 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DRAP1Q14919 205 aaPredicted RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HLA-BQ31612 363 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ELOA3BQ3SY89 546 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 FAM153CQ494X1 144 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TTMPQ5BVD1 217 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 C1orf220Q5T0J3 134 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 LEKR1Q6ZMV7 388 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 VPS36Q86VN1 386 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DNAAF5Q86Y56 855 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 GATAD2AQ86YP4 633 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 BVESQ8NE79 360 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ELOA3Q8NG57 546 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 SEC14L1Q92503 715 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 NDRG1Q92597 394 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 ZBTB9Q96C00 473 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 RCC1LQ96I51 464 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 HEXIM2Q96MH2 286 aaKnown RBP4.97□□□□□ -1.61
LINC00550-201ENST00000629293 KRT12Q99456 494 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 YIPF4Q9BSR8 244 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 GOLPH3Q9H4A6 298 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 FAM153AQ9UHL3 310 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 TRHDEQ9UKU6 1024 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 CLEC4EQ9ULY5 219 aa4.97□□□□□ -1.61
LINC00550-201ENST00000629293 DOPEY2Q9Y3R5 2298 aa4.96□□□□□ -1.61
LINC00550-201ENST00000629293 SLC12A8A0AV02 714 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CBX4O00257 560 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PGRMC1O00264 195 aaKnown RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 OPA1O60313 960 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CACNG3O60359 315 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ASLP04424 464 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CYBBP04839 570 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 RALAP11233 206 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PFKLP17858 780 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ACSL1P33121 698 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 GALCP54803 685 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 SPDYCQ5MJ68 293 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 SLC6A19Q695T7 634 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 SYCE1Q8N0S2 351 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CNTD1Q8N815 330 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 FAM13CQ8NE31 585 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 FAM76AQ8TAV0 307 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PARD3BQ8TEW8 1205 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 RFFLQ8WZ73 363 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 TAF4BQ92750 862 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ZIM3Q96PE6 472 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 TMPRSS13Q9BYE2 586 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ISCUQ9H1K1 167 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 EPB41L5Q9HCM4 733 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 DNAJC12Q9UKB3 198 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 NFU1Q9UMS0 254 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PLA2G4CQ9UP65 541 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CEP83Q9Y592 693 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 USP9XQ93008 2570 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CREBBPQ92793 2442 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 OBSL1O75147 1896 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CCDC188H7C350 402 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 PIK3R2O00459 728 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 P4HA2O15460 535 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CREB3O43889 395 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 STC2O76061 302 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 HLA-DRAP01903 254 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CD247P20963 164 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ATICP31939 592 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 GUCY2DQ02846 1103 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 BIRC2Q13490 618 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 ZNF234Q14588 700 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 KIF19Q2TAC6 998 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 SOWAHCQ53LP3 525 aaPredicted RBP4.96□□□□□ -1.62
LINC00550-201ENST00000629293 FOXR1Q6PIV2 292 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 CLEC20AQ6ZU45 233 aa4.96□□□□□ -1.62
LINC00550-201ENST00000629293 HTR3DQ70Z44 454 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms