RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 FSCN3Q9NQT6 498 aa13.8□□□□□ -0.2
PFDN5-220ENST00000628881 RBM22Q9NW64 420 aaKnown RBP eCLIP13.8□□□□□ -0.2
PFDN5-220ENST00000628881 CDV3Q9UKY7 258 aaKnown RBP13.8□□□□□ -0.2
PFDN5-220ENST00000628881 ZFR2Q9UPR6 939 aaKnown RBP13.8□□□□□ -0.2
PFDN5-220ENST00000628881 EFR3BQ9Y2G0 817 aa13.8□□□□□ -0.2
PFDN5-220ENST00000628881 DMXL1Q9Y485 3027 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 A0A1W2PQ67 120 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 TTC24A2A3L6 582 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 NEMP1O14524 444 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 TRAFD1O14545 582 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 NEBLO76041 1014 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 HLA-DQB2P05538 268 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 PECAM1P16284 738 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 SDHBP21912 280 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 CETN2P41208 172 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ITKQ08881 620 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ELP6Q0PNE2 266 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 AP1B1Q10567 949 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 GRIK2Q13002 908 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 UGP2Q16851 508 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 RSPO4Q2I0M5 234 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 LRRC73Q5JTD7 316 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 SEL1L3Q68CR1 1132 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 BBS12Q6ZW61 710 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ZSWIM9Q86XI8 627 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 UBE2Q2Q8WVN8 375 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 P3H4Q92791 437 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 IL12RB2Q99665 862 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 HEMGNQ9BXL5 484 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 TMEM9BQ9NQ34 198 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 AASDHPPTQ9NRN7 309 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 SAE1Q9UBE0 346 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 GGT7Q9UJ14 662 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 PACSIN2Q9UNF0 486 aaPredicted RBP13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ITM2BQ9Y287 266 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ATP8A1Q9Y2Q0 1164 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 ADAMTS9Q9P2N4 1935 aa13.79□□□□□ -0.2
PFDN5-220ENST00000628881 A0A1B0GVT2 93 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PRAMEF26H0Y7S4 382 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 KCNK1O00180 336 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 CDX4O14627 284 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 SLC30A4O14863 429 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 DDX3YO15523 660 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 HTRA2O43464 458 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 JCHAINP01591 159 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PYGMP11217 842 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PRLRP16471 622 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 HNRNPA2B1P22626 353 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 CES1P23141 567 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 CD38P28907 300 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 CSNK1EP49674 416 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 POLR2LP62875 67 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 ZBTB17Q13105 803 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PRKD1Q15139 912 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 STPG1Q5TH74 334 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 ERAP2Q6P179 960 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 LAYNQ6UX15 382 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 ADAT2Q7Z6V5 191 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PAF1Q8N7H5 531 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 CXorf40AQ8TE69 158 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 KLK6Q92876 244 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 SKA1Q96BD8 255 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 HES6Q96HZ4 224 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 GTPBP2Q9BX10 602 aaKnown RBP13.78□□□□□ -0.2
PFDN5-220ENST00000628881 SLC17A9Q9BYT1 436 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 TTLL3Q9Y4R7 772 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 PCDHGC4Q9Y5F7 938 aa13.78□□□□□ -0.2
PFDN5-220ENST00000628881 A0A1W2PR77 199 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 IGLON5A6NGN9 336 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 C4orf47A7E2U8 309 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 APOC4-APOC2K7ER74 178 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
PFDN5-220ENST00000628881 WNT9AO14904 365 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 VILLO15195 856 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 SLC31A1O15431 190 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 APOC2P02655 101 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 ITIH2P19823 946 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 AKT2P31751 481 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 MMP12P39900 470 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 C21orf59P57076 290 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 BNC1Q01954 994 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 DSC2Q02487 901 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 TRAF2Q12933 501 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 FGL2Q14314 439 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 STAT4Q14765 748 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 CACNA1EQ15878 2313 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
PFDN5-220ENST00000628881 MINDY1Q8N5J2 469 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms