RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 BEST1O76090 585 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 FUT4P22083 530 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 CCND3P30281 292 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 CREB5Q02930 508 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 HERC3Q15034 1050 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 BBS5Q8N3I7 341 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 SLC7A14Q8TBB6 771 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 SPPL2BQ8TCT7 592 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 OSBPL6Q9BZF3 934 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 OSBPL2Q9H1P3 480 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 ATXN3LQ9H3M9 355 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 GTF2IRD1Q9UHL9 959 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 MID2Q9UJV3 735 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 TARM1B6A8C7 271 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 AURKAO14965 403 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 UBDO15205 165 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 CA12O43570 354 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 APOA4P06727 396 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 BCAT1P54687 386 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 CBX3Q13185 183 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 LRP8Q14114 963 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 DPYSQ14117 519 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 CSHL1Q14406 222 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 PRPSAP1Q14558 356 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 MFSD10Q14728 455 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 RHOJQ9H4E5 214 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 SMOXQ9NWM0 555 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
PSME3-217ENST00000622892 CNOT11Q9UKZ1 510 aaKnown RBP13.11□□□□□ -0.31
PSME3-217ENST00000622892 SLCO1B7G3V0H7 640 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 MRASO14807 208 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 ATE1O95260 518 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 C8BP07358 591 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 CSE1LP55060 971 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 TAS2R39P59534 338 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 ESRRGP62508 458 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 STX5Q13190 355 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 NHSL2Q5HYW2 709 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 CLEC6AQ6EIG7 209 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 ESRP1Q6NXG1 681 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 PATL1Q86TB9 770 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 OFCC1Q8IZS5 231 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 HEXDCQ8WVB3 486 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SLC45A3Q96JT2 553 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 GOLGA2P5Q9HBQ8 144 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SHROOM3Q8TF72 1996 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 GIPC1O14908 333 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 AKAP5P24588 427 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 VARSP26640 1264 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 SLC7A1P30825 629 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 FCGRTP55899 365 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 DHFR2Q86XF0 187 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 ELMO2Q96JJ3 720 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 NAA50Q9GZZ1 169 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 NCKIPSDQ9NZQ3 722 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SUCOQ9UBS9 1254 aaKnown RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 GIMAP2Q9UG22 337 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 RNF103-CHMP3A0A140T963 221 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 FAM95CA0A1B0GW59 222 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 A0A1W2PPW3 197 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SH3PXD2BA1X283 911 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 DCLK1O15075 740 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SLC22A2O15244 555 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 TSPAN1O60635 241 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 STMN1P16949 149 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 LRPAP1P30533 357 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 ADSLP30566 484 aaPredicted RBP13.1□□□□□ -0.31
PSME3-217ENST00000622892 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 SPPL2CQ8IUH8 684 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 GPR78Q96P69 363 aa13.1□□□□□ -0.31
PSME3-217ENST00000622892 TRIM24O15164 1050 aa13.09□□□□□ -0.31
PSME3-217ENST00000622892 SPTLC1O15269 473 aa13.09□□□□□ -0.31
PSME3-217ENST00000622892 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
PSME3-217ENST00000622892 CD247P20963 164 aa13.09□□□□□ -0.31
PSME3-217ENST00000622892 ATP6V1B2P21281 511 aa13.09□□□□□ -0.31
PSME3-217ENST00000622892 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms