RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ANKRD49Q8WVL7 239 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 C3orf30Q96M34 536 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 UNC93B1Q9H1C4 597 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 ALG9Q9H6U8 611 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 GPRC5DQ9NZD1 345 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 VPS28Q9UK41 221 aa15.89■□□□□ 0.13
NPHP4-211ENST00000622020 RNF103-CHMP3A0A140T963 221 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 SLCO1B7G3V0H7 640 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ATP6V1G1O75348 118 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 KCNC1P48547 511 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 MAXP61244 160 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 PRKCQQ04759 706 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ITKQ08881 620 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 LPIN1Q14693 890 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 VPS26BQ4G0F5 336 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 DHFR2Q86XF0 187 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 RDH11Q8TC12 318 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 CYGBQ8WWM9 190 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 HNRNPABQ99729 332 aaKnown RBP15.88■□□□□ 0.13
NPHP4-211ENST00000622020 BRD8Q9H0E9 1235 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 CRTAC1Q9NQ79 661 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 RRN3Q9NYV6 651 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 FBXO5Q9UKT4 447 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 OR51F1A6NGY5 319 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 A8MT66 165 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 SNRPB2P08579 225 aaKnown RBP15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ATP6V1B2P21281 511 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 YAP1P46937 504 aaKnown RBP15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ARL13BQ3SXY8 428 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 PCID2Q5JVF3 399 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 BTBD8Q5XKL5 378 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 PIM3Q86V86 326 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 PCED1BQ96HM7 432 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ZNF597Q96LX8 424 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 PLEKHG4BQ96PX9 1271 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 SMOQ99835 787 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 HAUS8Q9BT25 410 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 KIFC1Q9BW19 673 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 ARHGEF38Q9NXL2 777 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 CROTQ9UKG9 612 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 CRYL1Q9Y2S2 319 aa15.88■□□□□ 0.13
NPHP4-211ENST00000622020 H3BNH8 94 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 UBFD1O14562 309 aaKnown RBP15.87■□□□□ 0.13
NPHP4-211ENST00000622020 CPB1P15086 417 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 ZNF23P17027 643 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 CASP2P42575 452 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 DAOAP59103 153 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 C6orf10Q5SRN2 563 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 POTEHQ6S545 545 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 MAMDC4Q6UXC1 1216 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 FIBCD1Q8N539 461 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 OR52K2Q8NGK3 314 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 ZNF560Q96MR9 790 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 PAPPA2Q9BXP8 1791 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 NRP2O60462 931 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 ATP5F1P24539 256 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-211ENST00000622020 CD151P48509 253 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 RPL34P49207 117 aaKnown RBP15.87■□□□□ 0.13
NPHP4-211ENST00000622020 GALNT2Q10471 571 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 TTC33Q6PID6 262 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-211ENST00000622020 OR6P1Q8NGX9 317 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 OSBPL11Q9BXB4 747 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 ADAMTS10Q9H324 1103 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 PLK2Q9NYY3 685 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 MPP6Q9NZW5 540 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 TRHDEQ9UKU6 1024 aa15.87■□□□□ 0.13
NPHP4-211ENST00000622020 MSI1O43347 362 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SRP72O76094 671 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SIX3O95343 332 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 STAMBPO95630 424 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 IMPDH2P12268 514 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 CTBSQ01459 385 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 TBCELQ5QJ74 424 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 GPR158Q5T848 1215 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ACBD5Q5T8D3 534 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ALKAL1Q6UXT8 129 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PIWIL4Q7Z3Z4 852 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 RETREG3Q86VR2 466 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 CARM1Q86X55 608 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PELI3Q8N2H9 469 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PPHLN1Q8NEY8 458 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PPTC7Q8NI37 304 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 FBXL20Q96IG2 436 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SLC2A13Q96QE2 648 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 MRPL57Q9BQC6 102 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 DUS2Q9NX74 493 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 CD4P01730 458 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 CYP2C9P11712 490 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ARCN1P48444 511 aaKnown RBP15.86■□□□□ 0.13
NPHP4-211ENST00000622020 SEMA3BQ13214 749 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 HERC3Q15034 1050 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 FUT11Q495W5 492 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 PRAMEF19Q5SWL8 479 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 NEPROQ6NW34 567 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ATPAF2Q8N5M1 289 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 ZMIZ2Q8NF64 920 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 KCNA7Q96RP8 456 aa15.86■□□□□ 0.13
NPHP4-211ENST00000622020 RBM22Q9NW64 420 aaKnown RBP eCLIP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms