RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TPRG1LQ5T0D9 272 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ACBD5Q5T8D3 534 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 FAXCQ5TGI0 409 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GJB7Q6PEY0 223 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 CREBRFQ8IUR6 639 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PHACTR4Q8IZ21 702 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 WDTC1Q8N5D0 677 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 DENND6BQ8NEG7 585 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 OR6K2Q8NGY2 324 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 RAB7BQ96AH8 199 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 LIN37Q96GY3 246 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 PKNOX2Q96KN3 472 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 NPY6RQ99463 290 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 LRRC61Q9BV99 259 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 CARD6Q9BX69 1037 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 C1QTNF2Q9BXJ5 285 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 TCEAL2Q9H3H9 227 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 EPB41L5Q9HCM4 733 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ANLNQ9NQW6 1124 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.94□□□□□ -1.14
CLK1-215ENST00000621181 IL17BQ9UHF5 180 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 RWDD2AQ9UIY3 292 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PADI4Q9UM07 663 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PCDHGC3Q9UN70 934 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ITM2BQ9Y287 266 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 FCF1Q9Y324 198 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 UNC13CQ8NB66 2214 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 DOCK4Q8N1I0 1966 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 TLN1Q9Y490 2541 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 DOPEY2Q9Y3R5 2298 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 A0A0U1RQJ8 604 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ILVBLA1L0T0 632 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SOWAHDA6NJG2 315 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 I6L893 689 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 URI1O94763 535 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 F9P00740 461 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 JMJD7P0C870 316 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PNMA6AP0CW24 399 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 TSHRP16473 764 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SLC5A2P31639 672 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 CXCR3P49682 368 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GNG11P61952 73 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PPARDQ03181 441 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PTK2Q05397 1052 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SLC20A2Q08357 652 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 EIF3IQ13347 325 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 KRT31Q15323 416 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 TERF2Q15554 542 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 TCEA2Q15560 299 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PTPN20Q4JDL3 420 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZNF805Q5CZA5 627 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 OTUD1Q5VV17 481 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZNF783Q6ZMS7 281 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 RAB11FIP2Q7L804 512 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 B3GNT8Q7Z7M8 397 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 VPS36Q86VN1 386 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZDHHC17Q8IUH5 632 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZNF683Q8IZ20 524 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 FBXO39Q8N4B4 442 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SCG3Q8WXD2 468 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 EXTL1Q92935 676 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZDHHC16Q969W1 377 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 C1orf74Q96LT6 269 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GFM1Q96RP9 751 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 KCNK17Q96T54 332 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 DESI2Q9BSY9 194 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 C1QTNF7Q9BXJ2 289 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 FOXP3Q9BZS1 431 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 STRADBQ9C0K7 418 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SIRPGQ9P1W8 387 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GULP1Q9UBP9 304 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GGT7Q9UJ14 662 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 IGLV3-10A0A075B6K4 115 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 DRGXA6NNA5 263 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 C16orf96A6NNT2 1141 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 KRIT1O00522 736 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 NTN3O00634 580 aaPredicted RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 YY2O15391 372 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 EFSO43281 561 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 ATP8B1O43520 1251 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 UGT2B4P06133 528 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 CASQ1P31415 396 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 GKP32189 559 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 EIF4A3P38919 411 aaKnown RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 ARHGAP25P42331 645 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 ABL2P42684 1182 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 BLKP51451 505 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 MARSP56192 900 aaKnown RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 ARF5P84085 180 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 GNA12Q03113 381 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 PAK1Q13153 545 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 POLD3Q15054 466 aaPredicted RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 TGIF1Q15583 401 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 TSR1Q2NL82 804 aaKnown RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 MACC1Q6ZN28 852 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 ATG14Q6ZNE5 492 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 TTC7BQ86TV6 843 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms