RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 GLUD1P00367 558 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 DHRS4L1P0CG22 281 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 RGRP47804 291 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 ERVFC1P60507 584 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 IHHQ14623 411 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 UGP2Q16851 508 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 PPM1LQ5SGD2 360 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 KYAT3Q6YP21 454 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 RGS9BPQ6ZS82 235 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 NLRP9Q7RTR0 991 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CRLF3Q8IUI8 442 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 TM6SF2Q9BZW4 377 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 ACTR5Q9H9F9 607 aaPredicted RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 ASAH2Q9NR71 780 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.01□□□□□ -0.813e-6■■■■□ 22.2
VTA1-205ENST00000620996 AURKAO14965 403 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 PLIN3O60664 434 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 F11P03951 625 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 PPP3CCP48454 512 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CD151P48509 253 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CSE1LP55060 971 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 CREMQ03060 361 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 LAMB3Q13751 1172 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 TSTD2Q5T7W7 516 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 GAREM2Q75VX8 874 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 ZC3HC1Q86WB0 502 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 TEX26Q8N6G2 289 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 SGF29Q96ES7 293 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 RILPQ96NA2 401 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 SMIM14Q96QK8 99 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 TMEM120AQ9BXJ8 343 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 EMILIN2Q9BXX0 1053 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 MYLK2Q9H1R3 596 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 RHOJQ9H4E5 214 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 FBXO5Q9UKT4 447 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 FCF1Q9Y324 198 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 ILVBLA1L0T0 632 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 KDELR3O43731 214 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 COQ9O75208 318 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 RFPL2O75678 378 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 HAUS5O94927 633 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CSKP41240 450 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 SNCBQ16143 134 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CAPRIN2Q6IMN6 1127 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 CNSTQ6PJW8 725 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 CCDC149Q6ZUS6 474 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 TBC1D1Q86TI0 1168 aaPredicted RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 MTDHQ86UE4 582 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 KIF2BQ8N4N8 673 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 HJURPQ8NCD3 748 aaPredicted RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 KCTD4Q8WVF5 259 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 DNAJC1Q96KC8 554 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 RXFP1Q9HBX9 757 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 HSFX1Q9UBD0 423 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 ZFP69BQ9UJL9 534 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 EMCNQ9ULC0 261 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
VTA1-205ENST00000620996 SSX2IPQ9Y2D8 614 aa10.01□□□□□ -0.81
VTA1-205ENST00000620996 LAMA3Q16787 3333 aa10□□□□□ -0.81
VTA1-205ENST00000620996 ATXN2Q99700 1313 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 GREB1Q4ZG55 1949 aa10□□□□□ -0.81
VTA1-205ENST00000620996 TRAV19A0A0A6YYK7 116 aa10□□□□□ -0.81
VTA1-205ENST00000620996 A0A1B0GVG6 124 aa10□□□□□ -0.81
VTA1-205ENST00000620996 H3BNC9 293 aa10□□□□□ -0.81
VTA1-205ENST00000620996 DCTN3O75935 186 aa10□□□□□ -0.81
VTA1-205ENST00000620996 MPOP05164 745 aa10□□□□□ -0.81
VTA1-205ENST00000620996 MYL2P10916 166 aa10□□□□□ -0.81
VTA1-205ENST00000620996 CPA3P15088 417 aa10□□□□□ -0.81
VTA1-205ENST00000620996 SP100P23497 879 aaPredicted RBP10□□□□□ -0.81
VTA1-205ENST00000620996 EPHB1P54762 984 aa10□□□□□ -0.81
VTA1-205ENST00000620996 RHOAP61586 193 aa10□□□□□ -0.81
VTA1-205ENST00000620996 ZXDBP98169 803 aa10□□□□□ -0.81
VTA1-205ENST00000620996 ATXN7L2Q5T6C5 722 aaPredicted RBP10□□□□□ -0.81
VTA1-205ENST00000620996 SPRED2Q7Z698 418 aa10□□□□□ -0.81
VTA1-205ENST00000620996 BBS7Q8IWZ6 715 aa10□□□□□ -0.81
VTA1-205ENST00000620996 ZNF276Q8N554 614 aa10□□□□□ -0.81
VTA1-205ENST00000620996 TDRD5Q8NAT2 981 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 OR13C4Q8NGS5 318 aa10□□□□□ -0.81
VTA1-205ENST00000620996 B4GALNT2Q8NHY0 566 aa10□□□□□ -0.81
VTA1-205ENST00000620996 GABPB2Q8TAK5 448 aaPredicted RBP10□□□□□ -0.81
VTA1-205ENST00000620996 PPP4R1Q8TF05 950 aa10□□□□□ -0.81
VTA1-205ENST00000620996 RSRC1Q96IZ7 334 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 TBATAQ96M53 351 aa10□□□□□ -0.81
VTA1-205ENST00000620996 IL21Q9HBE4 155 aa10□□□□□ -0.81
VTA1-205ENST00000620996 CHCHD3Q9NX63 227 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 HEY2Q9UBP5 337 aa10□□□□□ -0.81
VTA1-205ENST00000620996 PRKAG3Q9UGI9 489 aa10□□□□□ -0.81
VTA1-205ENST00000620996 CRYL1Q9Y2S2 319 aa10□□□□□ -0.81
VTA1-205ENST00000620996 MYO7AQ13402 2215 aa10□□□□□ -0.81
VTA1-205ENST00000620996 INSIG1O15503 277 aa10□□□□□ -0.81
VTA1-205ENST00000620996 TMCC1O94876 653 aa10□□□□□ -0.81
VTA1-205ENST00000620996 STMN1P16949 149 aa10□□□□□ -0.81
VTA1-205ENST00000620996 TARSP26639 723 aaKnown RBP10□□□□□ -0.81
VTA1-205ENST00000620996 ARNTP27540 789 aa10□□□□□ -0.81
VTA1-205ENST00000620996 GABRB3P28472 473 aa10□□□□□ -0.81
VTA1-205ENST00000620996 PMLP29590 882 aa10□□□□□ -0.81
VTA1-205ENST00000620996 ARSDP51689 593 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms