RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 NLRC5Q86WI3 1866 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 C17orf102A2RUQ5 167 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 DFFAO00273 331 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 NPHS1O60500 1241 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 ANXA9O76027 345 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 STMN1P16949 149 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 XRCC1P18887 633 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 DPP6P42658 865 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 RAB15P59190 212 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PLOD1Q02809 727 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 CEACAM7Q14002 265 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 RFTN1Q14699 578 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 POU6F1Q14863 301 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 FAM110CQ1W6H9 321 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 ARTNQ5T4W7 220 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 ESRP1Q6NXG1 681 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.17□□□□□ -1.1
GDNF-208ENST00000620847 DQX1Q8TE96 717 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 TRPC4APQ8TEL6 797 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 MYLPFQ96A32 169 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 BIRC8Q96P09 236 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 RTP3Q9BQQ7 232 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 COPS7BQ9H9Q2 264 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 GLOD4Q9HC38 313 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MIOSQ9NXC5 875 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 TCAF1Q9Y4C2 921 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 SQORQ9Y6N5 450 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 DOCK3Q8IZD9 2030 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MIA3Q5JRA6 1907 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MYOCOSA0A1B0GUC4 107 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MAFKO60675 156 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 THP07101 528 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PORP16435 677 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 ZNF23P17027 643 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 CYP2C18P33260 490 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 SLC1A2P43004 574 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PSMD7P51665 324 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MS4A2Q01362 244 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 C16orf72Q14CZ0 275 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 RWDD4Q6NW29 188 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 Q6ZNX1 250 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 C2CD4AQ8NCU7 369 aaPredicted RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 PPHLN1Q8NEY8 458 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 IPMKQ8NFU5 416 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 VPS50Q96JG6 964 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 GAD1Q99259 594 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 OSBPL6Q9BZF3 934 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 MRPL46Q9H2W6 279 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 TREX1Q9NSU2 369 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 SLC2A6Q9UGQ3 507 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 RIMS3Q9UJD0 308 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PCDHGB4Q9UN71 923 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 PCDHGB5Q9Y5G0 923 aa8.17□□□□□ -1.1
GDNF-208ENST00000620847 COPG1Q9Y678 874 aaKnown RBP8.17□□□□□ -1.1
GDNF-208ENST00000620847 TCAF2A6NFQ2 919 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 MATN3O15232 486 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 CAPNS1P04632 268 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 MYL3P08590 195 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 HOXC13P31276 330 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 CPT1AP50416 773 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 DNAJB13P59910 316 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 PHEXP78562 749 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 FAM171BQ6P995 826 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 PAOXQ6QHF9 649 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 NCCRP1Q6ZVX7 275 aaPredicted RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 TICAM1Q8IUC6 712 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 PELI3Q8N2H9 469 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 ATPAF2Q8N5M1 289 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 GIPC3Q8TF64 312 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 DLG3Q92796 817 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 RNF34Q969K3 372 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 FICDQ9BVA6 458 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 WDR41Q9HAD4 459 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 EFCAB1Q9HAE3 211 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 FAM105AQ9NUU6 356 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 TBC1D23Q9NUY8 699 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 FLRT1Q9NZU1 646 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 ITGB1BP2Q9UKP3 347 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 A0A087X1B8 175 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 TMEM233B4DJY2 109 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 BCAS2O75934 225 aaPredicted RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 PCSK1P29120 753 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 ACADVLP49748 655 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 GEMP55040 296 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 GK3PQ14409 553 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 TIGD5Q53EQ6 642 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 CCDC92Q53HC0 331 aaPredicted RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 MANEALQ5VSG8 457 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 NXNQ6DKJ4 435 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 BEND5Q7L4P6 421 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 SPATA6LQ8N4H0 392 aa8.16□□□□□ -1.1
GDNF-208ENST00000620847 TXNDC5Q8NBS9 432 aaKnown RBP8.16□□□□□ -1.1
GDNF-208ENST00000620847 MARK4Q96L34 752 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms