RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 IFT43Q96FT9 208 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SHDQ96IW2 340 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 LRIG1Q96JA1 1093 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SIGLEC10Q96LC7 697 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF641Q96N77 438 aaPredicted RBP8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SERPINB12Q96P63 405 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TUBGCP5Q96RT8 1024 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TRIB3Q96RU7 358 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ACOX2Q99424 681 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 NELL2Q99435 816 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 TBL1YQ9BQ87 522 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 APOL2Q9BQE5 337 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 FICDQ9BVA6 458 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 MTG2Q9H4K7 406 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 SUV39H2Q9H5I1 410 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 CHKBQ9Y259 395 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 DENND4AQ7Z401 1863 aa8.1□□□□□ -1.11
CPNE3-209ENST00000620393 HELZP42694 1942 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 A0A1W2PQ67 120 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MAGEB16A2A368 324 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ANKRD66B4E2M5 251 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SOCS5O75159 536 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SIN3BO75182 1162 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PGLSO95336 258 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PDHA1P08559 390 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ALADP13716 330 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 HLA-EP13747 358 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TPH1P17752 444 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 HLA-DPA1P20036 260 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CD72P21854 359 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CA4P22748 312 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PRKCHP24723 683 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SERPINA4P29622 427 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 NTSR1P30989 418 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MAGEA4P43358 317 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SEC13P55735 322 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SESN2P58004 480 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 STARD6P59095 220 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MSLNQ13421 630 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 OLIG2Q13516 323 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CCINQ13939 588 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SLC1A5Q15758 541 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 HIF1AQ16665 826 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 BBS9Q3SYG4 887 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 C2orf27AQ580R0 203 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SIRPB2Q5JXA9 342 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 BEND6Q5SZJ8 279 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ARMC12Q5T9G4 340 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 GDPD4Q6W3E5 623 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TPRG1Q6ZUI0 275 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TRMT11Q7Z4G4 463 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 GSPT2Q8IYD1 628 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CHPFQ8IZ52 775 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 STK40Q8N2I9 435 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 SLC25A41Q8N5S1 370 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ZNF366Q8N895 744 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 DNAAF3Q8N9W5 541 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TMIEQ8NEW7 156 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 OR6K2Q8NGY2 324 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PIH1D2Q8WWB5 315 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 LRRC39Q96DD0 335 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 FAM129BQ96TA1 746 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 FSD1LQ9BXM9 530 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TDRD1Q9BXT4 1180 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ADGRE3Q9BY15 652 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 TXLNGYQ9BZA5 131 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ARHGEF3Q9NR81 526 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 ARGLU1Q9NWB6 273 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CACNA2D2Q9NY47 1150 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 BFARQ9NZS9 450 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PPM1HQ9ULR3 514 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 CA14Q9ULX7 337 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MRPS17Q9Y2R5 130 aaKnown RBP8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 C5orf42Q9H799 3197 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 MYOFQ9NZM1 2061 aa8.09□□□□□ -1.11
CPNE3-209ENST00000620393 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 SYNCRIPO60506 623 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ADAM23O75077 832 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 LEFTY1O75610 366 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PIGNO95427 931 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PRNPP04156 253 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 FGF1P05230 155 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 EPHX1P07099 455 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CTSLP07711 333 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CHRNB1P11230 501 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms