RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 NEPROQ6NW34 567 aa16.17■□□□□ 0.18
DKC1-213ENST00000620277 SPPL2BQ8TCT7 592 aa16.17■□□□□ 0.18
DKC1-213ENST00000620277 NFKBIZQ9BYH8 718 aa16.17■□□□□ 0.18
DKC1-213ENST00000620277 SLC39A8Q9C0K1 460 aa16.17■□□□□ 0.18
DKC1-213ENST00000620277 PRPF19Q9UMS4 504 aaKnown RBP16.17■□□□□ 0.18
DKC1-213ENST00000620277 USP22Q9UPT9 525 aa16.17■□□□□ 0.18
DKC1-213ENST00000620277 GPR32O75388 356 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 BCAS2O75934 225 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 CPB1P15086 417 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 PKN3Q6P5Z2 889 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 ZNF410Q86VK4 478 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 TMEM102Q8N9M5 508 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 SEPHS2Q99611 448 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 ADAM28Q9UKQ2 775 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 FAF1Q9UNN5 650 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 TIMM22Q9Y584 194 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 PAPPA2Q9BXP8 1791 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 TRMUO75648 421 aaKnown RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 HLA-DQB2P05538 268 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 CDK4P11802 303 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 FOXA1P55317 472 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 PPP1R8Q12972 351 aaKnown RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 TRIM25Q14258 630 aaKnown RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 SNX17Q15036 470 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 ZIK1Q3SY52 487 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 SV2CQ496J9 727 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 BTBD8Q5XKL5 378 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 CIR1Q86X95 450 aaPredicted RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 CBR4Q8N4T8 237 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 CNDP1Q96KN2 507 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 HNRNPABQ99729 332 aaKnown RBP16.16■□□□□ 0.18
DKC1-213ENST00000620277 CACNA2D2Q9NY47 1150 aa16.16■□□□□ 0.18
DKC1-213ENST00000620277 HEATR9A2RTY3 570 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 H3BMM5 538 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 TRIM38O00635 465 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 CD4P01730 458 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 ATP5BP06576 529 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 LINC00032P0C843 101 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 ZNF26P17031 533 aaPredicted RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 SCNN1GP51170 649 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 IKBKEQ14164 716 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 RPS6KA2Q15349 733 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 PPHLN1Q8NEY8 458 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 MIPOL1Q8TD10 442 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 VPS33AQ96AX1 596 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 EBF1Q9UH73 591 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 ERI2A8K979 691 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 A8MT66 165 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 PTGESO14684 152 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 DENRO43583 198 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 B3GAT3O94766 335 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 CD151P48509 253 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 NPY2RP49146 381 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 PSMD7P51665 324 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 C16orf72Q14CZ0 275 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 LRRC43Q8N309 656 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 RIN3Q8TB24 985 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 SMIM14Q96QK8 99 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 CDC14AQ9UNH5 594 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 NRCAMQ92823 1304 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 UBFD1O14562 309 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 HNRNPCP07910 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
DKC1-213ENST00000620277 GJA5P36382 358 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 ADARP55265 1226 aaKnown RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
DKC1-213ENST00000620277 OTUD3Q5T2D3 398 aaPredicted RBP16.15■□□□□ 0.18
DKC1-213ENST00000620277 ANKRD13AQ8IZ07 590 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 SLCO4A1Q96BD0 722 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 FBXL20Q96IG2 436 aa16.15■□□□□ 0.18
DKC1-213ENST00000620277 PRSS51A0A1B0GVH4 220 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 CD86P42081 329 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 PFKFB4Q16877 469 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 ANKDD1AQ495B1 522 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 PCID2Q5JVF3 399 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 HMBOX1Q6NT76 420 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 C14orf80Q86SX3 495 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
DKC1-213ENST00000620277 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 ADCY4Q8NFM4 1077 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 HDAC10Q969S8 669 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 GPR78Q96P69 363 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 CNOT6Q9ULM6 557 aaKnown RBP16.14■□□□□ 0.17
DKC1-213ENST00000620277 DOLKQ9UPQ8 538 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 ACTL7AQ9Y615 435 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 HTTP42858 3142 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 A0A1B0GTL3 188 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 PCNAP12004 261 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 ATP6V1B2P21281 511 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 MAGEA12P43365 314 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 ARSDP51689 593 aa16.14■□□□□ 0.17
DKC1-213ENST00000620277 CSE1LP55060 971 aaKnown RBP16.14■□□□□ 0.17
DKC1-213ENST00000620277 GRB7Q14451 532 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms