RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 PIP4K2CQ8TBX8 421 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 NSMCE1Q8WV22 266 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 OR8D1Q8WZ84 308 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 ARRDC3Q96B67 414 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 TADA1Q96BN2 335 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 RTP4Q96DX8 246 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 GDAP1L1Q96MZ0 367 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 GORASP1Q9BQQ3 440 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
PDCD6-213ENST00000618970 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 ITM2CQ9NQX7 267 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 USP36Q9P275 1121 aaKnown RBP13.55□□□□□ -0.24
PDCD6-213ENST00000618970 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 PILRBQ9UKJ0 227 aa13.55□□□□□ -0.24
PDCD6-213ENST00000618970 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 C5orf60A6NFR6 353 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 C1QTNF9BB2RNN3 333 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 PGRMC1O00264 195 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 MID1O15344 667 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 KCNN4O15554 427 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 PIGNO95427 931 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 C1QTNF9P0C862 333 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 CEACAM1P13688 526 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ENGP17813 658 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SLC8A1P32418 973 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 KCNJ1P48048 391 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SCNN1BP51168 640 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 DSC2Q02487 901 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 BYSLQ13895 437 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ZNF235Q14590 738 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 CST6Q15828 149 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ANKRD20A3Q5VUR7 823 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 PEAR1Q5VY43 1037 aaPredicted RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ZNF776Q68DI1 518 aaPredicted RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 TTC27Q6P3X3 843 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 PRPF39Q86UA1 669 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ZSWIM9Q86XI8 627 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 CAMK1DQ8IU85 385 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SIPA1Q96FS4 1042 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 LRIG1Q96JA1 1093 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 CAPZA3Q96KX2 299 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 AGAP3Q96P47 875 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 VAT1Q99536 393 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SEMA3CQ99985 751 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 TMEM121Q9BTD3 319 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 NUSAP1Q9BXS6 441 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 POLR1EQ9GZS1 481 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 GLOD4Q9HC38 313 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 SERGEFQ9UGK8 458 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
PDCD6-213ENST00000618970 DMXL2Q8TDJ6 3036 aa13.54□□□□□ -0.24
PDCD6-213ENST00000618970 TRPM6Q9BX84 2022 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 TSPAN11A1L157 253 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PLK4O00444 970 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 KRIT1O00522 736 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 FZD6O60353 706 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 GCATO75600 419 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 IL1BP01584 269 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 IGLV3-19P01714 112 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 TUBB4AP04350 444 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 CFIP05156 583 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 ITGAVP06756 1048 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PROS1P07225 676 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 ETS1P14921 441 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 C5AR1P21730 350 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PSMD8P48556 350 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 SKOR1P84550 965 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 RPL6Q02878 288 aaKnown RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 TRAF2Q12933 501 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 KCTD19Q17RG1 926 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 RALGPS1Q5JS13 557 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 SPDYCQ5MJ68 293 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 SLC23A3Q6PIS1 610 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 UNQ6494/PRO21346Q6UXR6 183 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PID1Q7Z2X4 250 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PRUNE1Q86TP1 453 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 CACUL1Q86Y37 369 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 KLHDC8BQ8IXV7 354 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 BBS5Q8N3I7 341 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PRCCQ92733 491 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 ECHDC3Q96DC8 303 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 IMP4Q96G21 291 aaKnown RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
PDCD6-213ENST00000618970 SLC25A51Q9H1U9 297 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 SUV39H2Q9H5I1 410 aa13.53□□□□□ -0.24
PDCD6-213ENST00000618970 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms