RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 GALNT8Q9NY28 637 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 FBXO5Q9UKT4 447 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 MRPL42Q9Y6G3 142 aaKnown RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 PLXNB2O15031 1838 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 A8MT66 165 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 PTGESO14684 152 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 TRMUO75648 421 aaKnown RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 F9P00740 461 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 AXLP30530 894 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 BTBD8Q5XKL5 378 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 HMBOX1Q6NT76 420 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 DCLRE1AQ6PJP8 1040 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 CUZD1Q86UP6 607 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 ALDH16A1Q8IZ83 802 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 SMG8Q8ND04 991 aaKnown RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 TMIGD2Q96BF3 282 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 ZFP42Q96MM3 310 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 FCRL5Q96RD9 977 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 HAUS8Q9BT25 410 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 ATXN3LQ9H3M9 355 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 IRAK4Q9NWZ3 460 aa20.56■□□□□ 0.88
NEK3-208ENST00000618534 CNOT6Q9ULM6 557 aaKnown RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.56■□□□□ 0.88
NEK3-208ENST00000618534 TCRBV3S1A0A5B6 114 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 UNCXA6NJT0 531 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 ANXA9O76027 345 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 ZNF23P17027 643 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 KPNA2P52292 529 aaKnown RBP20.55■□□□□ 0.88
NEK3-208ENST00000618534 CDC42EP1Q00587 391 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 SEPT6Q14141 434 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 PCBP1Q15365 356 aaKnown RBP eCLIP20.55■□□□□ 0.88
NEK3-208ENST00000618534 DUSP28Q4G0W2 176 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 C6orf10Q5SRN2 563 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 ATPAF2Q8N5M1 289 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 TRIML2Q8N7C3 387 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 OR9I1Q8NGQ6 314 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 RNF34Q969K3 372 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 OLFM1Q99784 485 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 TMEM79Q9BSE2 394 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 hCG_2014768A0A024R1R8 64 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 MRASO14807 208 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 PMPCBO75439 489 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 H6PDO95479 791 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 MT-CO1P00395 513 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 LRPAP1P30533 357 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 PFKPQ01813 784 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 POU4F1Q01851 419 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 TRAP1Q12931 704 aaKnown RBP20.55■□□□□ 0.88
NEK3-208ENST00000618534 ZNF789Q5FWF6 425 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 ARHGAP12Q8IWW6 846 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 FAR2Q96K12 515 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 SENP8Q96LD8 212 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 SIK2Q9H0K1 926 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 CAAP1Q9H8G2 361 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 TIMMDC1Q9NPL8 285 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 TREX1Q9NSU2 369 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 THEGQ9P2T0 379 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 GMPR2Q9P2T1 348 aaKnown RBP20.55■□□□□ 0.88
NEK3-208ENST00000618534 CD300AQ9UGN4 299 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 NEU3Q9UQ49 428 aa20.55■□□□□ 0.88
NEK3-208ENST00000618534 SMIM35A0A1B0GVV1 85 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 HHLA1C9JL84 531 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 SNRPB2P08579 225 aaKnown RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 SLC7A1P30825 629 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 ZNF135P52742 658 aaPredicted RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 PSMD5Q16401 504 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 POTEHQ6S545 545 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 SLC39A3Q9BRY0 314 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 NOL11Q9H8H0 719 aaKnown RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 ARHGEF38Q9NXL2 777 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 RRN3Q9NYV6 651 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 PLOD2O00469 737 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 IPO13O94829 963 aaKnown RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 CCNCP24863 283 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 ADRA1AP35348 466 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 KLC3Q6P597 504 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 AFAP1L2Q8N4X5 818 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 PNPLA1Q8N8W4 532 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 GAB3Q8WWW8 586 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 PHF21BQ96EK2 531 aa20.54■□□□□ 0.88
NEK3-208ENST00000618534 EML4Q9HC35 981 aaKnown RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 RSL24D1Q9UHA3 163 aaKnown RBP20.54■□□□□ 0.88
NEK3-208ENST00000618534 ZNF839A8K0R7 811 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 H3BNH8 94 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 GPC4O75487 556 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 SRP72O76094 671 aaKnown RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 YWHAQP27348 245 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 FAM83EQ2M2I3 478 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 NOMO2Q5JPE7 1267 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 PITRM1Q5JRX3 1037 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 KIAA0930Q6ICG6 404 aaPredicted RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 KRT80Q6KB66 452 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 FAM110BQ8TC76 370 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 PHF12Q96QT6 1004 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 TSPAN18Q96SJ8 248 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 UHRF1Q96T88 793 aaPredicted RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 IL12RB2Q99665 862 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 FSD1LQ9BXM9 530 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 OLAHQ9NV23 265 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms