RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 ZNF284Q2VY69 593 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 DPCR1Q3MIW9 517 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CCDC92Q53HC0 331 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 SEL1L3Q68CR1 1132 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 OR6B2Q6IFH4 312 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 FBXL22Q6P050 247 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 GUSBP11Q6P575 273 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 GJB7Q6PEY0 223 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 Q6ZSR6 202 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 MICALCLQ6ZW33 695 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 EFL1Q7Z2Z2 1120 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 BNIPLQ7Z465 357 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 KRT77Q7Z794 578 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 LCA5Q86VQ0 697 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 PARP9Q8IXQ6 854 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CCDC170Q8IYT3 715 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 CCAR2Q8N163 923 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 SLC22A18ASQ8N1D0 253 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 KIAA1524Q8TCG1 905 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 RNF34Q969K3 372 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 SLC35B4Q969S0 331 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 SLC46A1Q96NT5 459 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 FEM1AQ9BSK4 669 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 MMADHCQ9H3L0 296 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 SYNDIG1Q9H7V2 258 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 ACP6Q9NPH0 428 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 LMBRD1Q9NUN5 540 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.7□□□□□ -1.02
GPC6-202ENST00000617456 COX16Q9P0S2 106 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 RABL2AQ9UBK7 228 aaPredicted RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 PPM1HQ9ULR3 514 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 IKBKGQ9Y6K9 419 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 SCINQ9Y6U3 715 aa8.7□□□□□ -1.02
GPC6-202ENST00000617456 TLN1Q9Y490 2541 aaKnown RBP8.7□□□□□ -1.02
GPC6-202ENST00000617456 GOLGA6L10A6NI86 522 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 M0QYT0 321 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 KPNA3O00505 521 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 MCF2LO15068 1137 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 TNFSF15O95150 251 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 PCDH8O95206 1070 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 CTSLP07711 333 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 H2AFXP16104 143 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 CLK1P49759 484 aaKnown RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 PSMD7P51665 324 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 HNRNPKP61978 463 aaKnown RBP eCLIP8.69□□□□□ -1.02
GPC6-202ENST00000617456 PITX1P78337 314 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 NRG1Q02297 640 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 CENPCQ03188 943 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 CLN3Q13286 438 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 DSG2Q14126 1118 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 TAF5Q15542 800 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 DEFB133Q30KQ1 61 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 PTPN20Q4JDL3 420 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 PIP5KL1Q5T9C9 394 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 CDKAL1Q5VV42 579 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 PPP1R2P3Q6NXS1 205 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 TRIM72Q6ZMU5 477 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 GCNT7Q6ZNI0 430 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 RBM44Q6ZP01 1051 aaKnown RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 FAM183BPQ6ZVS7 135 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 HORMAD1Q86X24 394 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 APLFQ8IW19 511 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 PLPP6Q8IY26 295 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 EXD3Q8N9H8 876 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 FAM174AQ8TBP5 190 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 LZICQ8WZA0 190 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 PPP1R14BQ96C90 147 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 ALG14Q96F25 216 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 CCDC114Q96M63 670 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 RPRD1AQ96P16 312 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 OSBPL9Q96SU4 736 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 C2orf49Q9BVC5 232 aaPredicted RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 DUSP23Q9BVJ7 150 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 LUC7LQ9NQ29 371 aaKnown RBP8.69□□□□□ -1.02
GPC6-202ENST00000617456 DYRK4Q9NR20 520 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 IL17BQ9UHF5 180 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 TMEM59LQ9UK28 342 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 VPS28Q9UK41 221 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 HS3ST2Q9Y278 367 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 ENTPD2Q9Y5L3 495 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 OR51B4Q9Y5P0 310 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 RP1P56715 2156 aa8.69□□□□□ -1.02
GPC6-202ENST00000617456 NYNRINQ9P2P1 1898 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 COL12A1Q99715 3063 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ILVBLA1L0T0 632 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 PABPN1LA6NDY0 278 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 A6NNZ2 444 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 MUSKO15146 869 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 CASC3O15234 703 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 PAGE1O75459 146 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 MTA2O94776 668 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ERBB2P04626 1255 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 CHRNA3P32297 505 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ETFBP38117 255 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 GGCXP38435 758 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms