RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 USP29Q9HBJ7 922 aa12.87□□□□□ -0.35
AL109954.3-201ENST00000615088 NLGN3Q9NZ94 848 aa12.87□□□□□ -0.35
AL109954.3-201ENST00000615088 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
AL109954.3-201ENST00000615088 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
AL109954.3-201ENST00000615088 TRABD2BA6NFA1 517 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 SCAMP1O15126 338 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CYP1A2P05177 515 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 TPM1P09493 284 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 RARAP10276 462 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 JUNDP17535 347 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 ITIH2P19823 946 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 AMPD1P23109 780 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CASP14P31944 242 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 IGFALSP35858 605 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 E2F1Q01094 437 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 NSUN2Q08J23 767 aaKnown RBP eCLIP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 TRIM14Q14142 442 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 ZNF235Q14590 738 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 POLNQ7Z5Q5 900 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 MARCH9Q86YJ5 346 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 NIPA2Q8N8Q9 360 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 ZNF548Q8NEK5 533 aaPredicted RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 MDM1Q8TC05 714 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CENPTQ96BT3 561 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 PCDH12Q9NPG4 1184 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 ZNHIT6Q9NWK9 470 aaKnown RBP12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 SPASTQ9UBP0 616 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 ATP8A1Q9Y2Q0 1164 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CHD5Q8TDI0 1954 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CACNA1BQ00975 2339 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 CEP295Q9C0D2 2601 aa12.86□□□□□ -0.35
AL109954.3-201ENST00000615088 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 CABIN1Q9Y6J0 2220 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 K7ESM1 405 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 RIOK3O14730 519 aaKnown RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 AQP9O43315 295 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 RGRP47804 291 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 SCNN1BP51168 640 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 AP1S1P61966 158 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 POLR2LP62875 67 aaKnown RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 LRRC14Q15048 493 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 IRF4Q15306 451 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 ARHGAP36Q6ZRI8 547 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 ZNF564Q8TBZ8 553 aaPredicted RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 LMX1AQ8TE12 382 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 IL12RB2Q99665 862 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 SLC13A1Q9BZW2 595 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 PCDH18Q9HCL0 1135 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 NCKIPSDQ9NZQ3 722 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 CTTNBP2NLQ9P2B4 639 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 APOBEC3BQ9UH17 382 aaKnown RBP12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 COQ6Q9Y2Z9 468 aa12.85□□□□□ -0.35
AL109954.3-201ENST00000615088 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CFAP69A5D8W1 941 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 TAF4O00268 1085 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CAPNS1P04632 268 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 H2AFZP0C0S5 128 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CKMT1AP12532 417 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 C6P13671 934 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 TCF4P15884 667 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 NFKBIAP25963 317 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 HTR1BP28222 390 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 MMP12P39900 470 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 LIG3P49916 1009 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 PEX5P50542 639 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 BLKP51451 505 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CDH6P55285 790 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CYP4F3Q08477 520 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 EIF2B5Q13144 721 aaKnown RBP12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 ZCCHC8Q6NZY4 707 aaKnown RBP12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 MACC1Q6ZN28 852 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 H2AFVQ71UI9 128 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 PHACTR4Q8IZ21 702 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
AL109954.3-201ENST00000615088 CTNNBL1Q8WYA6 563 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms