RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ECSITQ9BQ95 431 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 SELENOSQ9BQE4 189 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 S100A14Q9HCY8 104 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 RNF112Q9ULX5 631 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 RAD54BQ9Y620 910 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 NFS1Q9Y697 457 aa8.9□□□□□ -0.99
VPS11-206ENST00000614944 MTMR11A4FU01 709 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 GRXCR2A6NFK2 248 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 TBX10O75333 385 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 VNN2O95498 520 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CLPTM1O96005 669 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PDGFRAP16234 1089 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MAPKAPK2P49137 400 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 NKX2-5P52952 324 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 IFITM2Q01629 132 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 KCNC4Q03721 635 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ADIGQ0VDE8 80 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PLD1Q13393 1074 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 Q3ZCU0 254 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 TFDP3Q5H9I0 405 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 HERC6Q8IVU3 1022 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CASKIN2Q8WXE0 1202 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 FAM149B1Q96BN6 582 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ERLEC1Q96DZ1 483 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 OMA1Q96E52 524 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 BTBD6Q96KE9 485 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MYRFLQ96LU7 910 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ZNF670Q9BS34 389 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 HEMGNQ9BXL5 484 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ABCC13Q9NSE7 274 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 OLA1Q9NTK5 396 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 NCKIPSDQ9NZQ3 722 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 EDARQ9UNE0 448 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 DRG1Q9Y295 367 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 PCDHB12Q9Y5F1 795 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ATP6V1G2-DDX39BF2Z307 99 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 F8VP50 259 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CLDN5O00501 218 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 VCLP18206 1134 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 EPHB2P29323 1055 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 RHAGQ02094 409 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CCNG2Q16589 344 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 RTP2Q5QGT7 225 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 OTUD1Q5VV17 481 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 EGFLAMQ63HQ2 1017 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ALLCQ8N6M5 410 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 BADQ92934 168 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MRRFQ96E11 262 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 SGF29Q96ES7 293 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 REXO5Q96IC2 774 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 TUBA1CQ9BQE3 449 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 TRIM55Q9BYV6 548 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 RBM38Q9H0Z9 239 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 VPS37BQ9H9H4 285 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 KLHL14Q9P2G3 628 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 ANGPTL2Q9UKU9 493 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 USP18Q9UMW8 372 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PACSIN2Q9UNF0 486 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 PRG3Q9Y2Y8 225 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 STARD13Q9Y3M8 1113 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 TIMM13Q9Y5L4 95 aaPredicted RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 OBSL1O75147 1896 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MTCL1Q9Y4B5 1905 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 PSMD11O00231 422 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 E2F3O00716 465 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 APOL1O14791 398 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 KRT36O76013 467 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 HEXIM1O94992 359 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 PSMG1O95456 288 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 LTFP02788 710 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CTSAP10619 480 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MIPP30301 263 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CDKN2BP42772 138 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 NUP107P57740 925 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PRAMEP78395 509 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 FAPQ12884 760 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 CSTF3Q12996 717 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 PSMD5Q16401 504 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 NADK2Q4G0N4 442 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 SLC39A12Q504Y0 691 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 KCNT1Q5JUK3 1230 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 BRMS1LQ5PSV4 323 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 BORAQ6PGQ7 559 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 SPOCD1Q6ZMY3 1216 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 BTN2A1Q7KYR7 527 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 MON1AQ86VX9 555 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 FIBCD1Q8N539 461 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 PRMT1Q99873 361 aaKnown RBP8.89□□□□□ -0.99
VPS11-206ENST00000614944 APOL5Q9BWW9 433 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 GHITMQ9H3K2 345 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 SMOC2Q9H3U7 446 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 SDHAF3Q9NRP4 125 aa8.89□□□□□ -0.99
VPS11-206ENST00000614944 TMEM30AQ9NV96 361 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms