RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PSMA8Q8TAA3 256 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 FAM110BQ8TC76 370 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 HEXDCQ8WVB3 486 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 ESAMQ96AP7 390 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 RAD21L1Q9H4I0 556 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 SMOXQ9NWM0 555 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.87□□□□□ -0.51
CDH5-208ENST00000614547 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 ORC6Q9Y5N6 252 aa11.87□□□□□ -0.51
CDH5-208ENST00000614547 NFASCO94856 1347 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 H2AFYO75367 372 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 HGFP14210 728 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 LMO2P25791 158 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 HADHAP40939 763 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 CHRNA4P43681 627 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 RAB10P61026 200 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 IL5RAQ01344 420 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 MERTKQ12866 999 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ZYG11AQ6WRX3 759 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ATG14Q6ZNE5 492 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ZNF534Q76KX8 674 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ERO1BQ86YB8 467 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 PLD3Q8IV08 490 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 SLC7A5P1Q8MH63 180 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 SETD4Q9NVD3 440 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ZNF510Q9Y2H8 683 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 SNX2O60749 519 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 HMGB2P26583 209 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 MAXP61244 160 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 BST2Q10589 180 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 PMS2P3Q13401 168 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 TIGD2Q4W5G0 525 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 LCLAT1Q6UWP7 414 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ZNF555Q8NEP9 628 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 BLOC1S5Q8TDH9 187 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 MIR1-1HGQ9H1L0 117 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ATAD3AQ9NVI7 634 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 PIN4Q9Y237 131 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 TRAF6Q9Y4K3 522 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 GMEB1Q9Y692 573 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 TBC1D4O60343 1298 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ELK4P28324 431 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 PRDX6P30041 224 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 CLK1P49759 484 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 RHDQ02161 417 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 DPYSQ14117 519 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 FRG1Q14331 258 aaKnown RBP11.86□□□□□ -0.51
CDH5-208ENST00000614547 TGFBIQ15582 683 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 HDAC10Q969S8 669 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 ASB9Q96DX5 294 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 RBM22Q9NW64 420 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH5-208ENST00000614547 CACNG4Q9UBN1 327 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 TUBGCP4Q9UGJ1 667 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
CDH5-208ENST00000614547 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 HS6ST1O60243 411 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 RSL1D1O76021 490 aaKnown RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 KRT75O95678 551 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 CHEK2O96017 543 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 ARF4P18085 180 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 CYP3A5P20815 502 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 ATP5F1P24539 256 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 TPTEP56180 551 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 RELAQ04206 551 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 NEPROQ6NW34 567 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 TMEM53Q6P2H8 277 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 CNSTQ6PJW8 725 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 CNTD1Q8N815 330 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 FAIMQ9NVQ4 179 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 SLC2A6Q9UGQ3 507 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 G3V2L1 256 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 DEAF1O75398 565 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 SIX3O95343 332 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 CYP4B1P13584 511 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 IL7RP16871 459 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 ADSLP30566 484 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 NRG1Q02297 640 aaPredicted RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 RAB39AQ14964 217 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 DQX1Q8TE96 717 aaKnown RBP11.85□□□□□ -0.51
CDH5-208ENST00000614547 ULBP1Q9BZM6 244 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 VPS45Q9NRW7 570 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 CACNA2D2Q9NY47 1150 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 SEPT3Q9UH03 358 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 ANAPC2Q9UJX6 822 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 SHANK3Q9BYB0 1731 aa11.85□□□□□ -0.51
CDH5-208ENST00000614547 KLRG2A4D1S0 409 aaPredicted RBP11.84□□□□□ -0.51
CDH5-208ENST00000614547 GRID2O43424 1007 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms