RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	NETO2	Q8NC67	525 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LMX1A	Q8TE12	382 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TSC1	Q92574	1164 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ZNF599	Q96NL3	588 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	KLC2	Q9H0B6	622 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LHX3	Q9UBR4	397 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CLCA2	Q9UQC9	943 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ATP8A1	Q9Y2Q0	1164 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CSNK1G3	Q9Y6M4	447 aa		11.07	□□□□□ -0.64
NPIPB4-222	ENST00000614197	EPG5	Q9HCE0	2579 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CHD8	Q9HCK8	2581 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CACNA1B	Q00975	2339 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	INSIG1	O15503	277 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	AQP9	O43315	295 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ANXA6	P08133	673 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CTSE	P14091	401 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	SCNN1B	P51168	640 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PFN3	P60673	137 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PPARD	Q03181	441 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CYP4F3	Q08477	520 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TRIM14	Q14142	442 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LBR	Q14739	615 aa	Known RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	DPYSL2	Q16555	572 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	SMTNL2	Q2TAL5	461 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PROX2	Q3B8N5	592 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TMEM52B	Q4KMG9	183 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	KANSL1	Q7Z3B3	1105 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CAMK1D	Q8IU85	385 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	NDUFAF2	Q8N183	169 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TSEN2	Q8NCE0	465 aa	Known RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	MDM1	Q8TC05	714 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TEKT4	Q8WW24	435 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CENPT	Q96BT3	561 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PEBP4	Q96S96	227 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	NUP85	Q9BW27	656 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TRIM7	Q9C029	511 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	THAP2	Q9H0W7	228 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PDF	Q9HBH1	243 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PCDH12	Q9NPG4	1184 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	UCKL1	Q9NWZ5	548 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CWC15	Q9P013	229 aa	Known RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CTTNBP2NL	Q9P2B4	639 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	DKK4	Q9UBT3	224 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	APOBEC3B	Q9UH17	382 aa	Known RBP	11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	GGT7	Q9UJ14	662 aa		11.06	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TSPAN11	A1L157	253 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CFAP69	A5D8W1	941 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197		K7ESM1	405 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TPP1	O14773	563 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PLXNA2	O75051	1894 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	RASGRP1	O95267	797 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ALPI	P09923	528 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ELFN1	P0C7U0	828 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CKMT1A	P12532	417 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	C6	P13671	934 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	KEL	P23276	732 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	EIF4A3	P38919	411 aa	Known RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PEX5	P50542	639 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	DPYS	Q14117	519 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	NR0B2	Q15466	257 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ZSCAN23	Q3MJ62	389 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ODF2	Q5BJF6	829 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PRRT3	Q5FWE3	981 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ESRP1	Q6NXG1	681 aa	Known RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	MACC1	Q6ZN28	852 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LRRC69	Q6ZNQ3	347 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LRRC49	Q8IUZ0	686 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	MAP7D3	Q8IWC1	876 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PHACTR4	Q8IZ21	702 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	FSTL5	Q8N475	847 aa	Predicted RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	ARFGAP1	Q8N6T3	406 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	FAM181A	Q8N9Y4	354 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	TPCN2	Q8NHX9	752 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	APOLD1	Q96LR9	279 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	DEPDC7	Q96QD5	511 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PSKH2	Q96QS6	385 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	KLF6	Q99612	283 aa	Predicted RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	SCUBE2	Q9NQ36	999 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	KCTD5	Q9NXV2	234 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	SALL4	Q9UJQ4	1053 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	LHX6	Q9UPM6	363 aa		11.05	□□□□□ -0.64
NPIPB4-222	ENST00000614197	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CPED1	A4D0V7	1026 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CACNB4	O00305	520 aa	Predicted RBP	11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	PDE2A	O00408	941 aa	Predicted RBP	11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	RRP8	O43159	456 aa	Known RBP	11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	AKR1B10	O60218	316 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	MT-CO3	P00414	261 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	CYP1A2	P05177	515 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	GP1BA	P07359	652 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	H2AFZ	P0C0S5	128 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	RARA	P10276	462 aa		11.04	□□□□□ -0.64
NPIPB4-222	ENST00000614197	AMPD1	P23109	780 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms