RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ARL4AP40617 200 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 YPEL5P62699 121 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 E2F1Q01094 437 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 IL10RBQ08334 325 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 PIGHQ14442 188 aaPredicted RBP22.95■■□□□ 1.26
FAM228B-208ENST00000613899 MYLKQ15746 1914 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 UGP2Q16851 508 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 TMEM52BQ4KMG9 183 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 BOLA3Q53S33 107 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 ERAP2Q6P179 960 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 RFFLQ8WZ73 363 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 WRAP53Q9BUR4 548 aaKnown RBP22.95■■□□□ 1.26
FAM228B-208ENST00000613899 CAPN11Q9UMQ6 739 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 CSNK1G3Q9Y6M4 447 aa22.95■■□□□ 1.26
FAM228B-208ENST00000613899 LRRK1Q38SD2 2015 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 CKMT1AP12532 417 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 JUNDP17535 347 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 CLDN6P56747 220 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 CYP4F3Q08477 520 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 SMTNL2Q2TAL5 461 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 SRLQ86TD4 932 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 CACTIN-AS1Q8N1I8 211 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 FAM181AQ8N9Y4 354 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 TP53I13Q8NBR0 393 aaPredicted RBP22.94■■□□□ 1.26
FAM228B-208ENST00000613899 TSEN2Q8NCE0 465 aaKnown RBP22.94■■□□□ 1.26
FAM228B-208ENST00000613899 BTN2A2Q8WVV5 523 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 THAP2Q9H0W7 228 aa22.94■■□□□ 1.26
FAM228B-208ENST00000613899 LUC7L2Q9Y383 392 aaKnown RBP22.94■■□□□ 1.26
FAM228B-208ENST00000613899 K7ESM1 405 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 RIOK3O14730 519 aaKnown RBP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 AQP9O43315 295 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 ITIH2P19823 946 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 IL1R2P27930 398 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 DUSP3P51452 185 aaPredicted RBP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 RENBPP51606 427 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 TARDBPQ13148 414 aaKnown RBP eCLIP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 TPRG1LQ5T0D9 272 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 ZCCHC8Q6NZY4 707 aaKnown RBP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 MACC1Q6ZN28 852 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 NIPA2Q8N8Q9 360 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 CPLX3Q8WVH0 158 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 APOLD1Q96LR9 279 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 ZNF599Q96NL3 588 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 PCDH12Q9NPG4 1184 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 APOBEC3BQ9UH17 382 aaKnown RBP22.93■■□□□ 1.26
FAM228B-208ENST00000613899 ANAPC7Q9UJX3 599 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 ATP8A1Q9Y2Q0 1164 aa22.93■■□□□ 1.26
FAM228B-208ENST00000613899 BUB1BO60566 1050 aaPredicted RBP22.92■■□□□ 1.26
FAM228B-208ENST00000613899 NEBLO76041 1014 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 TPM3P06753 285 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 C6P13671 934 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 MMP12P39900 470 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 RGRP47804 291 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 INSM1Q01101 510 aaPredicted RBP22.92■■□□□ 1.26
FAM228B-208ENST00000613899 NSUN2Q08J23 767 aaKnown RBP eCLIP22.92■■□□□ 1.26
FAM228B-208ENST00000613899 EIF2B5Q13144 721 aaKnown RBP22.92■■□□□ 1.26
FAM228B-208ENST00000613899 TMCO4Q5TGY1 634 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 TMCO3Q6UWJ1 677 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 KDM7AQ6ZMT4 941 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 ARHGAP36Q6ZRI8 547 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 CAMK1DQ8IU85 385 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 TEKT4Q8WW24 435 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 HSPH1Q92598 858 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 TBATAQ96M53 351 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 NUP85Q9BW27 656 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 CAAP1Q9H8G2 361 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 NCKIPSDQ9NZQ3 722 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 IFNKQ9P0W0 207 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 SPASTQ9UBP0 616 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 SEPT3Q9UH03 358 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 IP6K2Q9UHH9 426 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 KLF15Q9UIH9 416 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 CLCA2Q9UQC9 943 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 RAXQ9Y2V3 346 aa22.92■■□□□ 1.26
FAM228B-208ENST00000613899 DSPP15924 2871 aaKnown RBP22.91■■□□□ 1.26
FAM228B-208ENST00000613899 GYPCP04921 128 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 GP1BAP07359 652 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 SERPINB6P35237 376 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 AP1S1P61966 158 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 BCL2L1Q07817 233 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 LRRC14Q15048 493 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 IRF4Q15306 451 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 NFKBIBQ15653 356 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 POLNQ7Z5Q5 900 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 PHACTR4Q8IZ21 702 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 PAF1Q8N7H5 531 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 CSPG4P5Q96PW8 444 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 PSKH2Q96QS6 385 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 NRSN2Q9GZP1 204 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 MBNL1Q9NR56 388 aaKnown RBP22.91■■□□□ 1.26
FAM228B-208ENST00000613899 GPSM3Q9Y4H4 160 aa22.91■■□□□ 1.26
FAM228B-208ENST00000613899 A0A087X0T9 212 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 TPP1O14773 563 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 CYP1A2P05177 515 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 FAM228BP0C875 321 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 RARAP10276 462 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 TCF4P15884 667 aa22.9■■□□□ 1.26
FAM228B-208ENST00000613899 HSPA9P38646 679 aaKnown RBP22.9■■□□□ 1.26
FAM228B-208ENST00000613899 EIF4A3P38919 411 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms