RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 SPATA33Q96N06 139 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 RBM15Q96T37 977 aaKnown RBP eCLIP6.77□□□□□ -1.336e-7■■□□□ 13.2
CDKAL1-204ENST00000613575 PRMT1Q99873 361 aaKnown RBP6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 BTBD2Q9BX70 525 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 NUSAP1Q9BXS6 441 aaKnown RBP6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 RBM38Q9H0Z9 239 aaKnown RBP6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 CDT1Q9H211 546 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 TLE6Q9H808 572 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 RPF1Q9H9Y2 349 aaKnown RBP6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 PCDH9Q9HC56 1237 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 S100A14Q9HCY8 104 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 HPS4Q9NQG7 708 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 POLE3Q9NRF9 147 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 ERAP1Q9NZ08 941 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 NCKIPSDQ9NZQ3 722 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 MALT1Q9UDY8 824 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 TRIM33Q9UPN9 1127 aa6.77□□□□□ -1.33
CDKAL1-204ENST00000613575 PDE4DIPQ5VU43 2346 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 BRCA1P38398 1863 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TMEM120BA0PK00 339 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 E7ESA3 106 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 ATP6V1G2-DDX39BF2Z307 99 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GOLGA8SH3BPF8 625 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CCRL2O00421 344 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 NOP56O00567 594 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CCDC22O60826 627 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CILPO75339 1184 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 LRCH4O75427 683 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 FAM155BO75949 473 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 C22orf31O95567 290 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 APBB3O95704 486 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 POP4O95707 220 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 RPS17P08708 135 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 IQCF3P0C7M6 154 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TXNP10599 105 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 HPGDP15428 266 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 RPS2P15880 293 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CD58P19256 250 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 KDELR1P24390 212 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GCAP28676 217 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 HADHAP40939 763 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TFAMQ00059 246 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CDC20Q12834 499 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TTLL4Q14679 1199 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TRIP13Q15645 432 aaPredicted RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 PKN2Q16513 984 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 HADHQ16836 314 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TRIM16LQ309B1 348 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 FUT11Q495W5 492 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 PTPN20Q4JDL3 420 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 ZNF667Q5HYK9 610 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TXNRD3NBQ6F5E7 133 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TAPT1Q6NXT6 567 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 PGM2L1Q6PCE3 622 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 MAMDC4Q6UXC1 1216 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 BEND4Q6ZU67 534 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 RHOUQ7L0Q8 258 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GLRX5Q86SX6 157 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CCDC25Q86WR0 208 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 VSIG1Q86XK7 387 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 RHPN2Q8IUC4 686 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SYTL1Q8IYJ3 562 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 LINC00518Q8N0U6 118 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 LRRC71Q8N4P6 559 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GLIS1Q8NBF1 620 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SLC4A11Q8NBS3 891 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GRPEL2Q8TAA5 225 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 LHFPL5Q8TAF8 219 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TTC8Q8TAM2 541 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CAPSLQ8WWF8 208 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 NRG4Q8WWG1 115 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 VPS33AQ96AX1 596 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 ZNF486Q96H40 463 aaPredicted RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TMEM176AQ96HP8 235 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 PLEKHA8Q96JA3 519 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 MCEEQ96PE7 176 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 WACQ9BTA9 647 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 TUBB6Q9BUF5 446 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 OR51B5Q9H339 312 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 DPEP3Q9H4B8 488 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SENP1Q9P0U3 644 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 REV1Q9UBZ9 1251 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SLC24A2Q9UI40 661 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CYTH4Q9UIA0 394 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 GDF2Q9UK05 429 aaPredicted RBP6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 PADI4Q9UM07 663 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 SHOC2Q9UQ13 582 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 STARD13Q9Y3M8 1113 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 CACNG2Q9Y698 323 aa6.76□□□□□ -1.33
CDKAL1-204ENST00000613575 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
CDKAL1-204ENST00000613575 STMND1H3BQB6 276 aa6.75□□□□□ -1.33
CDKAL1-204ENST00000613575 H3BRJ5 948 aa6.75□□□□□ -1.33
CDKAL1-204ENST00000613575 STX16-NPEPL1H3BU86 382 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms