RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SLC13A5Q86YT5 568 aaPredicted RBP16.76■□□□□ 0.27
IRF1-211ENST00000613424 TTC13Q8NBP0 860 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 HTR3CQ8WXA8 447 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 ORAI3Q9BRQ5 295 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 MIR1-1HGQ9H1L0 117 aa16.76■□□□□ 0.27
IRF1-211ENST00000613424 A0A1W2PPC4 97 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 A0A1W2PQU0 124 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 AREL1O15033 823 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 MTSS1O43312 755 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 SOCS5O75159 536 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 XPAP23025 273 aaPredicted RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 CD27P26842 260 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 MAT2AP31153 395 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 DPP6P42658 865 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 SUOXP51687 545 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 POLR2LP62875 67 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 TRAF2Q12933 501 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 PEAR1Q5VY43 1037 aaPredicted RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 TRIM69Q86WT6 500 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 PAF1Q8N7H5 531 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 C1orf216Q8TAB5 229 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 PDCD6IPQ8WUM4 868 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 FEM1CQ96JP0 617 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 TEKT5Q96M29 485 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 SMOC1Q9H4F8 434 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 PARD6AQ9NPB6 346 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 GGT7Q9UJ14 662 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 ZFR2Q9UPR6 939 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 ITM2BQ9Y287 266 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 R3HDM2Q9Y2K5 976 aaKnown RBP16.75■□□□□ 0.27
IRF1-211ENST00000613424 PCDHB9Q9Y5E1 797 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 RAI2Q9Y5P3 530 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 RALGAPA1Q6GYQ0 2036 aa16.75■□□□□ 0.27
IRF1-211ENST00000613424 A0A1W2PQ67 120 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 PATE3B3GLJ2 98 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 NEMP1O14524 444 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 RIOK3O14730 519 aaKnown RBP16.74■□□□□ 0.27
IRF1-211ENST00000613424 LATO43561 262 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 TSPAN6O43657 245 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 LRP3O75074 770 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 PRKCGP05129 697 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 MMP2P08253 660 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 SERPINF2P08697 491 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 ZNF806P0C7X5 589 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 CXCR5P32302 372 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 HOXD12P35452 270 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 SKOR1P84550 965 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 PID1Q7Z2X4 250 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
IRF1-211ENST00000613424 PRPF39Q86UA1 669 aaKnown RBP16.74■□□□□ 0.27
IRF1-211ENST00000613424 HORMAD1Q86X24 394 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 CDKL3Q8IVW4 592 aaPredicted RBP16.74■□□□□ 0.27
IRF1-211ENST00000613424 ZNF567Q8N184 647 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 KLK6Q92876 244 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 VAT1Q99536 393 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 SLC25A51Q9H1U9 297 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 USP29Q9HBJ7 922 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 GLOD4Q9HC38 313 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 PCDH12Q9NPG4 1184 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 SEMA4GQ9NTN9 838 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 TPX2Q9ULW0 747 aaKnown RBP16.74■□□□□ 0.27
IRF1-211ENST00000613424 SLCO1B1Q9Y6L6 691 aa16.74■□□□□ 0.27
IRF1-211ENST00000613424 DOCK9Q9BZ29 2069 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 EP300Q09472 2414 aaPredicted RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 CEP104O60308 925 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 FZD6O60353 706 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 PGLSO95336 258 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 ATP1A1P05023 1023 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 PDHA1P08559 390 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 GNSP15586 552 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 CD68P34810 354 aaPredicted RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 CD86P42081 329 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 RPS21P63220 83 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 CSRP2Q16527 193 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 DUOXA1Q1HG43 343 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 ZNF284Q2VY69 593 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 TMEM52BQ4KMG9 183 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 ARMC12Q5T9G4 340 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 SEL1L3Q68CR1 1132 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 KIAA1161Q6NSJ0 714 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 ZCCHC9Q8N567 271 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 CEP76Q8TAP6 659 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 SLC35B2Q8TB61 432 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 IMP4Q96G21 291 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 RBM15Q96T37 977 aaKnown RBP eCLIP16.73■□□□□ 0.27
IRF1-211ENST00000613424 FERMT1Q9BQL6 677 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 KLHL8Q9P2G9 620 aaPredicted RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 SUSD2Q9UGT4 822 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 TRHDEQ9UKU6 1024 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 PHTF1Q9UMS5 762 aa16.73■□□□□ 0.27
IRF1-211ENST00000613424 RIF1Q5UIP0 2472 aaKnown RBP16.73■□□□□ 0.27
IRF1-211ENST00000613424 A0A1B0GTW7 788 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 IGLON5A6NGN9 336 aa16.72■□□□□ 0.27
IRF1-211ENST00000613424 BCAT2O15382 392 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms