RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CNOT11Q9UKZ1 510 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 PCDHGC3Q9UN70 934 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MAGI3Q5TCQ9 1506 aa8.82□□□□□ -1
TTC28-208ENST00000612946 FAM237BA0A1B0GVD1 139 aa8.82□□□□□ -1
TTC28-208ENST00000612946 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 NRP2O60462 931 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CD2P06729 351 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CD72P21854 359 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ACSL1P33121 698 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SEPHS1P49903 392 aa8.82□□□□□ -1
TTC28-208ENST00000612946 RENBPP51606 427 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ADAM15Q13444 863 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CCNIQ14094 377 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SBK1Q52WX2 424 aa8.82□□□□□ -1
TTC28-208ENST00000612946 SH3RF3Q8TEJ3 882 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 THRSPQ92748 146 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ZNF347Q96SE7 839 aa8.82□□□□□ -1
TTC28-208ENST00000612946 NECTIN3Q9NQS3 549 aa8.82□□□□□ -1
TTC28-208ENST00000612946 GGA3Q9NZ52 723 aa8.82□□□□□ -1
TTC28-208ENST00000612946 ACSL5Q9ULC5 683 aa8.82□□□□□ -1
TTC28-208ENST00000612946 NCKAP1Q9Y2A7 1128 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CEP170BQ9Y4F5 1589 aaPredicted RBP8.82□□□□□ -1
TTC28-208ENST00000612946 ANKDD1BA6NHY2 528 aa8.82□□□□□ -1
TTC28-208ENST00000612946 CLUP10909 449 aa8.82□□□□□ -1
TTC28-208ENST00000612946 MGME1Q9BQP7 344 aa8.82□□□□□ -1
TTC28-208ENST00000612946 PPA2Q9H2U2 334 aa8.82□□□□□ -1
TTC28-208ENST00000612946 NXF3Q9H4D5 531 aaKnown RBP8.82□□□□□ -1
TTC28-208ENST00000612946 GREM2Q9H772 168 aa8.82□□□□□ -1
TTC28-208ENST00000612946 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
TTC28-208ENST00000612946 USP17L5A8MUK1 530 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SKP1P63208 163 aa8.81□□□□□ -1
TTC28-208ENST00000612946 GSTCDQ8NEC7 633 aa8.81□□□□□ -1
TTC28-208ENST00000612946 C11orf24Q96F05 449 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 AURKBQ96GD4 344 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 INPP4AQ96PE3 977 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 NEURL4Q96JN8 1562 aa8.81□□□□□ -1
TTC28-208ENST00000612946 FTH1P02794 183 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SLC2A2P11168 524 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 PRG2P13727 222 aa8.81□□□□□ -1
TTC28-208ENST00000612946 OMPP47874 163 aa8.81□□□□□ -1
TTC28-208ENST00000612946 DCAF4L1Q3SXM0 396 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TRIM40Q6P9F5 258 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZNF773Q6PK81 442 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LZTR1Q8N653 840 aa8.81□□□□□ -1
TTC28-208ENST00000612946 OR5T2Q8NGG2 359 aa8.81□□□□□ -1
TTC28-208ENST00000612946 H0YAE9 185 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LTA4HP09960 611 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 ZNF14P17017 642 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 PRKACBP22694 351 aa8.81□□□□□ -1
TTC28-208ENST00000612946 GLRA2P23416 452 aa8.81□□□□□ -1
TTC28-208ENST00000612946 YWHAZP63104 245 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 DEFA5Q01523 94 aa8.81□□□□□ -1
TTC28-208ENST00000612946 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 C16orf46Q6P387 395 aa8.81□□□□□ -1
TTC28-208ENST00000612946 MSANTD1Q6ZTZ1 278 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SMG8Q8ND04 991 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 ATG4AQ8WYN0 398 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CRISPLD1Q9H336 500 aa8.81□□□□□ -1
TTC28-208ENST00000612946 XPNPEP3Q9NQH7 507 aa8.81□□□□□ -1
TTC28-208ENST00000612946 PCDHGB3Q9Y5G1 929 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZCCHC11Q5TAX3 1644 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 TNS3Q68CZ2 1445 aa8.81□□□□□ -1
TTC28-208ENST00000612946 FAM170AA1A519 330 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TPP1O14773 563 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SLC22A3O75751 556 aa8.81□□□□□ -1
TTC28-208ENST00000612946 GABBR2O75899 941 aa8.81□□□□□ -1
TTC28-208ENST00000612946 KDM4BO94953 1096 aa8.81□□□□□ -1
TTC28-208ENST00000612946 BPGMP07738 259 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CLCN5P51795 746 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ATP6V0D1P61421 351 aa8.81□□□□□ -1
TTC28-208ENST00000612946 FOXM1Q08050 763 aa8.81□□□□□ -1
TTC28-208ENST00000612946 AKIRIN2Q53H80 203 aa8.81□□□□□ -1
TTC28-208ENST00000612946 QSOX2Q6ZRP7 698 aa8.81□□□□□ -1
TTC28-208ENST00000612946 STOML3Q8TAV4 291 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ITCHQ96J02 903 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TPD52L3Q96J77 140 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TMEM121Q9BTD3 319 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CDH7Q9ULB5 785 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SIK3Q9Y2K2 1263 aa8.81□□□□□ -1
TTC28-208ENST00000612946 GRIN2DO15399 1336 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TADA2AO75478 443 aa8.81□□□□□ -1
TTC28-208ENST00000612946 PIGNO95427 931 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ITGB3P05106 788 aa8.81□□□□□ -1
TTC28-208ENST00000612946 DNAJB1P25685 340 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CYP4F8P98187 520 aa8.81□□□□□ -1
TTC28-208ENST00000612946 PRKCQQ04759 706 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TCEAL6Q6IPX3 200 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CATSPER4Q7RTX7 472 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ELMOD1Q8N336 334 aa8.81□□□□□ -1
TTC28-208ENST00000612946 NKAPQ8N5F7 415 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 ZNF607Q96SK3 696 aa8.81□□□□□ -1
TTC28-208ENST00000612946 APOL5Q9BWW9 433 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TMEM5Q9Y2B1 443 aa8.81□□□□□ -1
TTC28-208ENST00000612946 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
TTC28-208ENST00000612946 FAM189A1O60320 539 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ANXA3P12429 323 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms