RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 CMTM8Q8IZV2 173 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 SPATA22Q8NHS9 363 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 KLHL25Q9H0H3 589 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 NKX2-4Q9H2Z4 354 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF395Q9H8N7 513 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 MAN1C1Q9NR34 630 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 TRNAU1APQ9NX07 287 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 DEC1Q9P2X7 70 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 SLC7A8Q9UHI5 535 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 GPR32O75388 356 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ATP5BP06576 529 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 EPB42P16452 691 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 GEMIN4P57678 1058 aaKnown RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 BCL2L1Q07817 233 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 GTF2H3Q13889 308 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 MARCH8Q5T0T0 291 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 LDB1Q86U70 411 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 XYLT1Q86Y38 959 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 DEFB119Q8N690 84 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 APBB2Q92870 758 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 RNF31Q96EP0 1072 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ACBD6Q9BR61 282 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 EVLQ9UI08 416 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 TAGLN3Q9UI15 199 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 YIPF1Q9Y548 306 aa10.94□□□□□ -0.66
FAM3A-221ENST00000612856 ARID1BQ8NFD5 2236 aaPredicted RBP10.94□□□□□ -0.66
FAM3A-221ENST00000612856 C2orf81A6NN90 581 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PTGESO14684 152 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 SRP72O76094 671 aaKnown RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PTPN7P35236 360 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 MRPS22P82650 360 aaKnown RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 IMPG1Q17R60 797 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 RALGPS1Q5JS13 557 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TRMT11Q7Z4G4 463 aaKnown RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FBXO27Q8NI29 283 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 E2F7Q96AV8 911 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PHF21BQ96EK2 531 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 C2orf49Q9BVC5 232 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FAM96AQ9H5X1 160 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 COPS7BQ9H9Q2 264 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 SPATA7Q9P0W8 599 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 Q9Y3F1 56 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ANXA9O76027 345 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ERVK-10P10266 1014 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 HSPA14Q0VDF9 509 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PCBP1Q15365 356 aaKnown RBP eCLIP10.93□□□□□ -0.666e-7■■■■□ 21.8
FAM3A-221ENST00000612856 ARMC12Q5T9G4 340 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ZDHHC14Q8IZN3 488 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 SH3RF2Q8TEC5 729 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 AASDHPPTQ9NRN7 309 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PCDHA3Q9Y5H8 950 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3DA0A087WVF3 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3IA0A087WXS9 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3EA0A087X179 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3KA0A087X1G2 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3FA6NER0 549 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3LB9A6J9 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FKBP6O75344 327 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 MT-CYBP00156 380 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3HP0C7X1 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FGFR3P22607 806 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 MAP4P27816 1152 aaKnown RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TPD52P55327 224 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 SGCGQ13326 291 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PLEKHG4Q58EX7 1191 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FBXO48Q5FWF7 155 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3GQ6DHY5 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ZNF470Q6ECI4 717 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3CQ6IPX1 549 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ACAD11Q709F0 780 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TRAPPC5Q8IUR0 188 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TRIM48Q8IWZ4 208 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TBC1D3Q8IZP1 549 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 ANKLE1Q8NAG6 615 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 USP13Q92995 863 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 FBXL18Q96ME1 805 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 HERPUD2Q9BSE4 406 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TMEM109Q9BVC6 243 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 NFKBIZQ9BYH8 718 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 SEMA6AQ9H2E6 1030 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 CRTAC1Q9NQ79 661 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 PDLIM7Q9NR12 457 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 CD274Q9NZQ7 290 aa10.93□□□□□ -0.66
FAM3A-221ENST00000612856 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 GREB1LQ9C091 1923 aaPredicted RBP10.93□□□□□ -0.66
FAM3A-221ENST00000612856 TMEM191CA6NGB0 347 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 BTNL10A8MVZ5 291 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 SUPT3HB4E1H0 165 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 SLC31A1O15431 190 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CYP1A2P05177 515 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HIST1H2AGP0C0S8 130 aaPredicted RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 TFE3P19532 575 aaPredicted RBP10.92□□□□□ -0.66
FAM3A-221ENST00000612856 HIST1H2ADP20671 130 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 CD72P21854 359 aa10.92□□□□□ -0.66
FAM3A-221ENST00000612856 GDI1P31150 447 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms