RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NFATC4Q14934 902 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 LRRC14Q15048 493 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 TRIM65Q6PJ69 517 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 GDPD4Q6W3E5 623 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 FMR1NBQ8N0W7 255 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 SPATA20Q8TB22 786 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 JPH3Q8WXH2 748 aaPredicted RBP17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 ARHGEF2Q92974 986 aaKnown RBP17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 TMEM51Q9NW97 253 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 HPCAL4Q9UM19 191 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
CSNK1E-215ENST00000612795 NBASA2RRP1 2371 aa17.39■□□□□ 0.38
CSNK1E-215ENST00000612795 RELNP78509 3460 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 CXorf51AA0A1B0GTR3 108 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 STMND1H3BQB6 276 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 CD160O95971 181 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 GLB1P16278 677 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 CR2P20023 1033 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 XPAP23025 273 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 SRP54P61011 504 aaKnown RBP17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 PTK2Q05397 1052 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 KCNAB2Q13303 367 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 ARHGEF7Q14155 803 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 MYLK3Q32MK0 819 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 SLC25A52Q3SY17 297 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 CERCAMQ5T4B2 595 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 ATXN7L2Q5T6C5 722 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 FAM102AQ5T9C2 384 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 SPRED1Q7Z699 444 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 GPR156Q8NFN8 814 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 NT5C3BQ969T7 300 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 HAPLN3Q96S86 360 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 CRACR2AQ9BSW2 395 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 PLCB1Q9NQ66 1216 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 APPL1Q9UKG1 709 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 COQ6Q9Y2Z9 468 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
CSNK1E-215ENST00000612795 B4DGG1 531 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 POLE2P56282 527 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 RAD51Q06609 339 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 LEKR1Q6ZMV7 388 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 FAM131BQ86XD5 332 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 ZNF354CQ86Y25 554 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 SHC3Q92529 594 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 PDXPQ96GD0 296 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 WDR92Q96MX6 357 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 GDAP1L1Q96MZ0 367 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 APEX2Q9UBZ4 518 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 OR1A2Q9Y585 309 aa17.38■□□□□ 0.37
CSNK1E-215ENST00000612795 NBPF19A0A087WUL8 3843 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 IGSF6O95976 241 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 TNFP01375 233 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 PNLIPP16233 465 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 ITIH2P19823 946 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 MARSP56192 900 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 FOXK1P85037 733 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 ELP6Q0PNE2 266 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 C14orf28Q4W4Y0 310 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 RWDD4Q6NW29 188 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 TAF8Q7Z7C8 310 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 SLITRK4Q8IW52 837 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 IL22RA1Q8N6P7 574 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 FAM46DQ8NEK8 389 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 RBM15Q96T37 977 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 APOOQ9BUR5 198 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 SLC12A9Q9BXP2 914 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 PDCL3Q9H2J4 239 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 LRIT1Q9P2V4 623 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 PPARGC1AQ9UBK2 798 aaKnown RBP17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 MAN1B1Q9UKM7 699 aa17.37■□□□□ 0.37
CSNK1E-215ENST00000612795 PCCBP05166 539 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 CASRP41180 1078 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 CCR10P46092 362 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 MAPKAPK2P49137 400 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 STX17P56962 302 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 INPP5AQ14642 412 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 C16orf72Q14CZ0 275 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 IGFBP7Q16270 282 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 ARTNQ5T4W7 220 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 FOXR2Q6PJQ5 311 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 NYAP1Q6ZVC0 841 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 TMPRSS9Q7Z410 1059 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 NCAPGQ9BPX3 1015 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 B3GNT4Q9C0J1 378 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 SEMA6CQ9H3T2 930 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 RDH14Q9HBH5 336 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 NDFIP2Q9NV92 336 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 TUBD1Q9UJT1 453 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 ANAPC2Q9UJX6 822 aa17.36■□□□□ 0.37
CSNK1E-215ENST00000612795 FAM170AA1A519 330 aa17.35■□□□□ 0.37
CSNK1E-215ENST00000612795 RAMP2O60895 175 aa17.35■□□□□ 0.37
CSNK1E-215ENST00000612795 TMCC1O94876 653 aa17.35■□□□□ 0.37
CSNK1E-215ENST00000612795 CPNE6O95741 557 aa17.35■□□□□ 0.37
CSNK1E-215ENST00000612795 SLC9A1P19634 815 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms