RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ADKP55263 362 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 GRM3Q14832 879 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 CYTH1Q15438 398 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 TMEM52BQ4KMG9 183 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 C6orf132Q5T0Z8 1188 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 ACAD10Q6JQN1 1059 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 DCUN1D2Q6PH85 259 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 APTXQ7Z2E3 356 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 DNAAF5Q86Y56 855 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 MCOLN2Q8IZK6 566 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 LSM14AQ8ND56 463 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 EXOC2Q96KP1 924 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 NCAPGQ9BPX3 1015 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 WRAP53Q9BUR4 548 aaKnown RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 SLC13A1Q9BZW2 595 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 LRRC19Q9H756 370 aa17.96■□□□□ 0.47
SSBP1-215ENST00000612337 UBA2Q9UBT2 640 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-215ENST00000612337 LRRK1Q38SD2 2015 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 TEX51A0A1B0GUA7 166 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 TSPAN11A1L157 253 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 ATXN7O15265 892 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-215ENST00000612337 TCEA3O75764 348 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 PIGNO95427 931 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 ANXA6P08133 673 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 FERP16591 822 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 DESP17661 470 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 XPAP23025 273 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-215ENST00000612337 NDST2P52849 883 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 TPI1P60174 286 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 PPARDQ03181 441 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 C1orf61Q13536 156 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 IRF4Q15306 451 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 STX1AQ16623 288 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 FAXCQ5TGI0 409 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 IGF2-ASQ6U949 168 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 RBM44Q6ZP01 1051 aaKnown RBP17.95■□□□□ 0.46
SSBP1-215ENST00000612337 GPR155Q7Z3F1 870 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 SLC35F3Q8IY50 421 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 SLC39A7Q92504 469 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 CLPBQ9H078 707 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 PDFQ9HBH1 243 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 ASCL3Q9NQ33 180 aa17.95■□□□□ 0.46
SSBP1-215ENST00000612337 MUSKO15146 869 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 YY2O15391 372 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 TSHRP16473 764 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 PEX5P50542 639 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 BLKP51451 505 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 OGDHQ02218 1023 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 NCAPHQ15003 741 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 LRRC14Q15048 493 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 UGP2Q16851 508 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 PERM1Q5SV97 790 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 NAT6Q93015 286 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 ZNF641Q96N77 438 aaPredicted RBP17.94■□□□□ 0.46
SSBP1-215ENST00000612337 HSD3B7Q9H2F3 369 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 PCDH12Q9NPG4 1184 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 THSD1Q9NS62 852 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 COQ6Q9Y2Z9 468 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 ENTPD2Q9Y5L3 495 aa17.94■□□□□ 0.46
SSBP1-215ENST00000612337 A0A1W2PNU3 283 aaPredicted RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 TMEM110-MUSTN1A8MSY1 372 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 EIF3CLB5ME19 914 aaKnown RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 J3KR12 359 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 PRAMEF11O60813 436 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 C6P13671 934 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 CXADRP78310 365 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 MAMLD1Q13495 774 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 AGERQ15109 404 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 WSCD2Q2TBF2 565 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 ESRP1Q6NXG1 681 aaKnown RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 ERAP2Q6P179 960 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 BRAT1Q6PJG6 821 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 CRTC1Q6UUV9 634 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 IRF2BP2Q7Z5L9 587 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 FSTL5Q8N475 847 aaPredicted RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 WDR48Q8TAF3 677 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 ATXN7L3BQ96GX2 97 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 NAF1Q96HR8 494 aaKnown RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 EIF3CQ99613 913 aaKnown RBP17.93■□□□□ 0.46
SSBP1-215ENST00000612337 SYT11Q9BT88 431 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 PARVAQ9NVD7 372 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 TAS2R14Q9NYV8 317 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 MYO6Q9UM54 1294 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 AP4E1Q9UPM8 1137 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 SATB2Q9UPW6 733 aa17.93■□□□□ 0.46
SSBP1-215ENST00000612337 ARHGAP42A6NI28 874 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 EEF2KO00418 725 aaKnown RBP17.92■□□□□ 0.46
SSBP1-215ENST00000612337 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-215ENST00000612337 PRB1P04280 392 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 PSMA2P25787 234 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 CSNK1DP48730 415 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 HK3P52790 923 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 UCNP55089 124 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 ELOCQ15369 112 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 C3orf38Q5JPI3 329 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms