RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 HAPLN3Q96S86 360 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ECSITQ9BQ95 431 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PAAF1Q9BRP4 392 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 RTKNQ9BST9 563 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 NMRK2Q9NPI5 230 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HACD3Q9P035 362 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CRLS1Q9UJA2 301 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 RNF112Q9ULX5 631 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 A0A1B0GUL6 1792 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SYCE1LA8MT33 242 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 H0Y626 953 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 LBPP18428 481 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TSTA3Q13630 321 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 ZYG11AQ6WRX3 759 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PAQR9Q6ZVX9 377 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PLD6Q8N2A8 252 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 NCLNQ969V3 563 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 MARK4Q96L34 752 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TRIM54Q9BYV2 358 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 S100A14Q9HCY8 104 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 MIOSQ9NXC5 875 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 GMIPQ9P107 970 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TBX18O95935 607 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CLPTM1O96005 669 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 EEF1B2P24534 225 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 GMPRP36959 345 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 LDB1Q86U70 411 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 DHFR2Q86XF0 187 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PSMG2Q969U7 264 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SUSD3Q96L08 255 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SMOC2Q9H3U7 446 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SEMA4BQ9NPR2 832 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 CAPN8A6NHC0 703 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 BTN3A1O00481 513 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 NR5A2O00482 541 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SNNO75324 88 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 FYNP06241 537 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 LYNP07948 512 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HIST1H2AGP0C0S8 130 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 TSPAN8P19075 237 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HIST1H2ADP20671 130 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ALDH1A3P47895 512 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ATP6V0D1P61421 351 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 IRF9Q00978 393 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 ZNF460Q14592 562 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 KCNA10Q16322 511 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CYP4V2Q6ZWL3 525 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 MFN1Q8IWA4 741 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 OR10T2Q8NGX3 314 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 METTL6Q8TCB7 284 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 GCNAQ96QF7 691 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PTPN18Q99952 460 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 H2AFJQ9BTM1 129 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 APOL5Q9BWW9 433 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CLPBQ9H078 707 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 KCNK13Q9HB14 408 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 TBKBP1A7MCY6 615 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 GSTA4O15217 222 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CSPG5O95196 566 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 IRF1P10914 325 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 GRK4P32298 578 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 SLC7A2P52569 658 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 XIAPP98170 497 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 AASDHQ4L235 1098 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 HECTD3Q5T447 861 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 NRAPQ86VF7 1730 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 NKAPQ8N5F7 415 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 TRPC4APQ8TEL6 797 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PTCD3Q96EY7 689 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 PGAP3Q96FM1 320 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 FCRL3Q96P31 734 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 PRPF18Q99633 342 aaKnown RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 CAAP1Q9H8G2 361 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 CLIC5Q9NZA1 410 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 PCDHB8Q9UN66 801 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 FAF1Q9UNN5 650 aaPredicted RBP6.42□□□□□ -1.38
SNX13-213ENST00000611725 NDUFAF1Q9Y375 327 aa6.42□□□□□ -1.38
SNX13-213ENST00000611725 NT5C1B-RDH14C9J2C7 533 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SCAMP3O14828 347 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 AZIN1O14977 448 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 AHCYL1O43865 530 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 AMHP03971 560 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 HLA-DQB2P05538 268 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 HGFP14210 728 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 CRHR2Q13324 411 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 DYNC1I2Q13409 638 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 VARS2Q5ST30 1063 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 HECTD2Q5U5R9 776 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FBXW8Q8N3Y1 598 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 DBF4BQ8NFT6 615 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SPDYE1Q8NFV5 336 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 CDC26Q8NHZ8 85 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ZSCAN18Q8TBC5 510 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 NT5C3BQ969T7 300 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 IL12RB2Q99665 862 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ADGRE3Q9BY15 652 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms