RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 PPP4R4Q6NUP7 873 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 DHRS4L2Q6PKH6 230 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 CATSPER4Q7RTX7 472 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 KDELC2Q7Z4H8 507 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 ZNF554Q86TJ5 538 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 DHFR2Q86XF0 187 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 CBR4Q8N4T8 237 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 LZTR1Q8N653 840 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 HM13Q8TCT9 377 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 C12orf43Q96C57 262 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 DUS3LQ96G46 650 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 HNRNPABQ99729 332 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 TANC1Q9C0D5 1861 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 FAM49AQ9H0Q0 323 aaPredicted RBP15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 IL1RL2Q9HB29 575 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 MRPL40Q9NQ50 206 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 FBXW11Q9UKB1 542 aa15.24■□□□□ 0.03
PCDHGB1-202ENST00000611598 A8MT66 165 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 NRP2O60462 931 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 TPST1O60507 370 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 SRP72O76094 671 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 SEC24DO94855 1032 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 CLIC3O95833 236 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 TFPTP0C1Z6 253 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 NCAM1P13591 858 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 NME5P56597 212 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 YBX1P67809 324 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 MAPRE2Q15555 327 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 UGP2Q16851 508 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 PCID2Q5JVF3 399 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 C8orf82Q6P1X6 216 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 GPR141Q7Z602 305 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 RETREG3Q86VR2 466 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 ANKFN1Q8N957 763 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 MUC3BQ9H195 1237 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 RBPJLQ9UBG7 517 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 AURKCQ9UQB9 309 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 C9JVG2 144 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 MTSS1O43312 755 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 ATP6V1G1O75348 118 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 GPC4O75487 556 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 LRIG2O94898 1065 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 DNAJB13P59910 316 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 SCAPQ12770 1279 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 TECRLQ5HYJ1 363 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 SAMD4BQ5PRF9 694 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 KIAA0319Q5VV43 1072 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 IL31Q6EBC2 164 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 DENND5AQ6IQ26 1287 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 GPR180Q86V85 440 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 FUNDC1Q8IVP5 155 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 OR2T34Q8NGX1 318 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 EDEM1Q92611 657 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 NTAN1Q96AB6 310 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 TNIP3Q96KP6 325 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 OLFM1Q99784 485 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 TBL1YQ9BQ87 522 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 FICDQ9BVA6 458 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 OSBPL6Q9BZF3 934 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 ATXN3LQ9H3M9 355 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 GDAP2Q9NXN4 497 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 OR12D3Q9UGF7 316 aa15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 MTF2Q9Y483 593 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-202ENST00000611598 BOLA2-SMG1P6H3BVE0 249 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 UBFD1O14562 309 aaKnown RBP15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 BMP2P12643 396 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 CHRNA4P43681 627 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 PRPSAP1Q14558 356 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 GRIK4Q16099 956 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 ERMP1Q7Z2K6 904 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 SLC9A7Q96T83 725 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 TCF12Q99081 682 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 OSMRQ99650 979 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 MED10Q9BTT4 135 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 EFHD1Q9BUP0 239 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 TMEM30AQ9NV96 361 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 CACNG4Q9UBN1 327 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 EGFL7Q9UHF1 273 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 RAD54BQ9Y620 910 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 MYLKQ15746 1914 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 SH3PXD2BA1X283 911 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 H3BRB1 525 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 HUS1O60921 280 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 ATE1O95260 518 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 CD151P48509 253 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 DALRD3Q5D0E6 543 aaKnown RBP15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 FAM45BPQ6NSW5 357 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 TTC33Q6PID6 262 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 FAM45AQ8TCE6 357 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms