RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 CSF2P04141 144 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 MX2P20592 715 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 CD9P21926 228 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 SP100P23497 879 aaPredicted RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 RRM1P23921 792 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 GGCXP38435 758 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 CCT8P50990 548 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 ST8SIA6P61647 398 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 KDSRQ06136 332 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 SUZ12Q15022 739 aaKnown RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 ANO4Q32M45 955 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 DAB2IPQ5VWQ8 1189 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 ZNF449Q6P9G9 518 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 YTHDF3Q7Z739 585 aaKnown RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 ALYREFQ86V81 257 aaKnown RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 RBM12BQ8IXT5 1001 aaKnown RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 PQLC3Q8N755 202 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 DDI1Q8WTU0 396 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 RMDN1Q96DB5 314 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 DUSP23Q9BVJ7 150 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 BTBD1Q9H0C5 482 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 VPS16Q9H269 839 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 USP18Q9UMW8 372 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 ZFR2Q9UPR6 939 aaKnown RBP7.25□□□□□ -1.25
CBWD1-219ENST00000611457 SLC17A4Q9Y2C5 497 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 PCDHA3Q9Y5H8 950 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 BRWD1Q9NSI6 2320 aa7.25□□□□□ -1.25
CBWD1-219ENST00000611457 BHMG1C9JSJ3 638 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TOX3O15405 576 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 DNTTP04053 509 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 ADRB3P13945 408 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RGS7P49802 495 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CLNS1AP54105 237 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CKAP4Q07065 602 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 KLHL30Q0D2K2 578 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 KLF1Q13351 362 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TRA2AQ13595 282 aaKnown RBP eCLIP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CDH18Q13634 790 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TAF5Q15542 800 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RSPO4Q2I0M5 234 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 NAIF1Q69YI7 327 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CCNI2Q6ZMN8 369 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 BBS12Q6ZW61 710 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 KIAA1328Q86T90 577 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SLC35F6Q8N357 371 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 OR4C6Q8NH72 309 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RNF25Q96BH1 459 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 PLEKHG4BQ96PX9 1271 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TSGA10Q9BZW7 698 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CENPHQ9H3R5 247 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 KLHL42Q9P2K6 505 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SEPT3Q9UH03 358 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TRHDEQ9UKU6 1024 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 NDRG2Q9UN36 371 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 PLA2G4CQ9UP65 541 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 LNP1A1A4G5 178 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TBC1D3BA6NDS4 549 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 FKBP9O95302 570 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 MMP2P08253 660 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 HNRNPA2B1P22626 353 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 MIPP30301 263 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SLC8A1P32418 973 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 AP1ARQ63HQ0 302 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SFTPA1Q8IWL2 248 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RCOR2Q8IZ40 523 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 ARMC2Q8NEN0 867 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 ARRDC2Q8TBH0 407 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 EDEM1Q92611 657 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 FUBP1Q96AE4 644 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 IMP4Q96G21 291 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 FEM1CQ96JP0 617 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RBM15Q96T37 977 aaKnown RBP eCLIP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 MAGEE1Q9HCI5 957 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 LATS2Q9NRM7 1088 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SPATS2LQ9NUQ6 558 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 IGLV3-16A0A075B6K0 115 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CAPN8A6NHC0 703 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CAPN9O14815 690 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 BCAT2O15382 392 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 PSMD3O43242 534 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 SYNCRIPO60506 623 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RAMP2O60895 175 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 FTLP02792 175 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 TIMP2P16035 220 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CA4P22748 312 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 NNMTP40261 264 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 GARSP41250 739 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 ACADVLP49748 655 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 C11orf91Q3C1V1 193 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RNF187Q5TA31 235 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 RNF219Q5W0B1 726 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 NAXDQ8IW45 347 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 EIF1ADQ8N9N8 165 aaKnown RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 GPBAR1Q8TDU6 330 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 LIN37Q96GY3 246 aaPredicted RBP7.24□□□□□ -1.25
CBWD1-219ENST00000611457 HES6Q96HZ4 224 aa7.24□□□□□ -1.25
CBWD1-219ENST00000611457 CFAP57Q96MR6 1250 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms