RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TANC1Q9C0D5 1861 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 A0A087X1B8 175 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 H0Y3Z8 333 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 DNAJB1P25685 340 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 LEPRP48357 1165 aaKnown RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 HTRA3P83110 453 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 TSNAXIP1Q2TAA8 658 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 FAM43BQ6ZT52 329 aaPredicted RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 ARHGAP24Q8N264 748 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 OLFM1Q99784 485 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 DRC3Q9H069 523 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 MAGEH1Q9H213 219 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
NEK3-205ENST00000610828 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
NEK3-205ENST00000610828 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 TARM1B6A8C7 271 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SLC7A4O43246 635 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 LDB2O43679 373 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 DLX3O60479 287 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 EFEMP2O95967 443 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SERPINF2P08697 491 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 PIRTP0C851 137 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 IRF1P10914 325 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 MYL4P12829 197 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 MPSTP25325 297 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 CORO1AP31146 461 aaKnown RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 CDH4P55283 916 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 CSHL1Q14406 222 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 C5orf22Q49AR2 442 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 ARL13AQ5H913 290 aaPredicted RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 EPGNQ6UW88 154 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 TMC7Q7Z402 723 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 RNF135Q8IUD6 432 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 BBS5Q8N3I7 341 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 OVCA2Q8WZ82 227 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SGF29Q96ES7 293 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 PRICKLE1Q96MT3 831 aaPredicted RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 ZNF599Q96NL3 588 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 MMADHCQ9H3L0 296 aaPredicted RBP13.71□□□□□ -0.21
NEK3-205ENST00000610828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
NEK3-205ENST00000610828 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
NEK3-205ENST00000610828 PIGNO95427 931 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 KLKB1P03952 638 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 HLA-DPA1P20036 260 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 GLDCP23378 1020 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 CLCN5P51795 746 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 PRKAA2P54646 552 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 TLE2Q04725 743 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 IKBKEQ14164 716 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.22
NEK3-205ENST00000610828 SLC39A5Q6ZMH5 540 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 ANKRD33Q7Z3H0 272 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 RNF168Q8IYW5 571 aaPredicted RBP13.71□□□□□ -0.22
NEK3-205ENST00000610828 POU5F2Q8N7G0 328 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 MAPK15Q8TD08 544 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 FEM1CQ96JP0 617 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 FAM161BQ96MY7 647 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 TACO1Q9BSH4 297 aaKnown RBP13.71□□□□□ -0.22
NEK3-205ENST00000610828 MFSD1Q9H3U5 465 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.22
NEK3-205ENST00000610828 GPAMQ9HCL2 828 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 RAP2CQ9Y3L5 183 aa13.71□□□□□ -0.22
NEK3-205ENST00000610828 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.71□□□□□ -0.22
NEK3-205ENST00000610828 MEI4A8MW99 385 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 E9PBE3 544 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 KLHL41O60662 606 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 STC2O76061 302 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 PARNO95453 639 aaKnown RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 FGF1P05230 155 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 RPL14P50914 215 aaKnown RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 SGSHP51688 502 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 KPNA2P52292 529 aaKnown RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 PLD1Q13393 1074 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 PTPRCAPQ14761 206 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 FAM83EQ2M2I3 478 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 KHDC1Q4VXA5 237 aaKnown RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 FAM117BQ6P1L5 589 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 KLHDC10Q6PID8 442 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 TMCO2Q7Z6W1 182 aaPredicted RBP13.7□□□□□ -0.22
NEK3-205ENST00000610828 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 PLD4Q96BZ4 506 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 EXOC2Q96KP1 924 aa13.7□□□□□ -0.22
NEK3-205ENST00000610828 TBATAQ96M53 351 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms