RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 NOD2Q9HC29 1040 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 TRIM10Q9UDY6 481 aa12.88□□□□□ -0.35
CD9-212ENST00000610354 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 PRAMEF26H0Y7S4 382 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 TLR4O00206 839 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 MATN3O15232 486 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 TSPAN6O43657 245 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 SH3BP5O60239 455 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 MMP20O60882 483 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 PAK4O96013 591 aaPredicted RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 CCNCP24863 283 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 NUDT1P36639 197 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 CDKN2BP42772 138 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 RENBPP51606 427 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 VAV2P52735 878 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 RPS21P63220 83 aaKnown RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 FAM193AP78312 1265 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 ZNF235Q14590 738 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 IFI16Q16666 785 aaKnown RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 UGP2Q16851 508 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 IL27RAQ6UWB1 636 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 LRRC49Q8IUZ0 686 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 MFSD2AQ8NA29 543 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 DDX56Q9NY93 547 aaKnown RBP12.87□□□□□ -0.35
CD9-212ENST00000610354 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
CD9-212ENST00000610354 POM121BA6NF01 834 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 HTRA2O43464 458 aaPredicted RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 PSTPIP1O43586 416 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 CER1O95813 267 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 KRT10P13645 584 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 HNRNPA2B1P22626 353 aaKnown RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 MMP13P45452 471 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 C21orf59P57076 290 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 AP1S1P61966 158 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 IL9RQ01113 521 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 TRAF2Q12933 501 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 HNRNPDQ14103 355 aaKnown RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 STAT4Q14765 748 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 GRM3Q14832 879 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 PTPRRQ15256 657 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 TPRG1LQ5T0D9 272 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 N4BP2L1Q5TBK1 243 aaPredicted RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 MARC1Q5VT66 337 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 PSAPL1Q6NUJ1 521 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 SPOCD1Q6ZMY3 1216 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 ABI3BPQ7Z7G0 1075 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 KATNAL2Q8IYT4 538 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 OR13H1Q8NG92 308 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 ASB12Q8WXK4 309 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 FATE1Q969F0 183 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 HDAC11Q96DB2 347 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 OLFM3Q96PB7 478 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 LGMNQ99538 433 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
CD9-212ENST00000610354 ATP13A3Q9H7F0 1226 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
CD9-212ENST00000610354 A0A1B0GTQ1 180 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 GRID2IPA4D2P6 1211 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 APOL1O14791 398 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 GM2AP17900 193 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 SERPINA4P29622 427 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 AKT2P31751 481 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
CD9-212ENST00000610354 MMP12P39900 470 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 NOVA1P51513 510 aaKnown RBP12.85□□□□□ -0.35
CD9-212ENST00000610354 DYNLT1P63172 113 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 RALGDSQ12967 914 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 SLC14A1Q13336 389 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 ALG1LQ6GMV1 187 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 DAAM2Q86T65 1068 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 IQCHQ86VS3 1027 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 CCDC13Q8IYE1 715 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 SLC22A18ASQ8N1D0 253 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 ARRDC2Q8TBH0 407 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 CENPTQ96BT3 561 aa12.85□□□□□ -0.35
CD9-212ENST00000610354 LENG8Q96PV6 779 aaPredicted RBP12.85□□□□□ -0.35
CD9-212ENST00000610354 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms