RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
USP6NL-205ENST00000609104 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
USP6NL-205ENST00000609104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
USP6NL-205ENST00000609104 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
USP6NL-205ENST00000609104 TRIM3O75382 744 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 HSF2Q03933 536 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RAP1GAP2Q684P5 730 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 KBTBD8Q8NFY9 601 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RCN3Q96D15 328 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 U3KQV3 271 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 LIASO43766 372 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 SLC6A2P23975 617 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ABRQ12979 859 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 VAT1Q99536 393 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 EURLQ9NYK6 297 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 HGFP14210 728 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 NR1H2P55055 460 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 MRPL57Q9BQC6 102 aaKnown RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RFXANKO14593 260 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 TGFB3P10600 412 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 PPM1LQ5SGD2 360 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 FAM131AQ6UXB0 335 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 AKAP14Q86UN6 197 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 MARCH2Q9P0N8 246 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 NT5DC1Q5TFE4 455 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 FAR1Q8WVX9 515 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RAD51AP1Q96B01 352 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 TMEM119Q4V9L6 283 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-205ENST00000609104 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 A0A087X0B3 334 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 S100GP29377 79 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ITCHQ96J02 903 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 PPP3R2Q96LZ3 170 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 AMD1P17707 334 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 EPHA3P29320 983 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 FCHO2Q0JRZ9 810 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 HTRA1Q92743 480 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 OR52E6Q96RD3 313 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 ZNF780BQ9Y6R6 833 aa13.15□□□□□ -0.3
USP6NL-205ENST00000609104 AREL1O15033 823 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 S100A6P06703 90 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 GALNT3Q14435 633 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 MFSD10Q14728 455 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 SMCO1Q147U7 214 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 PDK4Q16654 411 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF655Q8N720 491 aaPredicted RBP13.15□□□□□ -0.31
USP6NL-205ENST00000609104 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 CXorf40AQ8TE69 158 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 PNMA5Q96PV4 448 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 CITED4Q96RK1 184 aa13.15□□□□□ -0.31
USP6NL-205ENST00000609104 R3HDM2Q9Y2K5 976 aaKnown RBP13.15□□□□□ -0.31
USP6NL-205ENST00000609104 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 GMFGO60234 142 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ITGAVP06756 1048 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.319e-9■■■□□ 15.7
USP6NL-205ENST00000609104 CD101Q93033 1021 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ADGRE2Q9UHX3 823 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 H0Y858 1186 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TTPAP49638 278 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 IL18Q14116 193 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 NKAPQ8N5F7 415 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RBMX2Q9Y388 322 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PGRMC2O15173 223 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 USP4Q13107 963 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PIK3R6Q5UE93 754 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PAGE2Q7Z2X7 111 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RERGQ96A58 199 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ACP6Q9NPH0 428 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 HBS1LQ9Y450 684 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PCDHGA3Q9Y5H0 932 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 CAPGP40121 348 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ALKBH2Q6NS38 261 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RP9Q8TA86 221 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 LENG9Q96B70 501 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TBC1D3BA6NDS4 549 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SMIM11AP58511 58 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms