RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 ETNK2Q9NVF9 386 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 FTSJ1Q9UET6 329 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 CACNA1AO00555 2505 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 LAMA1P25391 3075 aa11.66□□□□□ -0.54
CCDC12-209ENST00000604164 A0A0A6YYK5 440 aaPredicted RBP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SPAARA0A1B0GVQ0 90 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 LRRD1A4D1F6 860 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 H3BM21 787 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 KCNK3O14649 394 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CD48P09326 243 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CDK4P11802 303 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CA4P22748 312 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 KDELR1P24390 212 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CCNCP24863 283 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 EPHA8P29322 1005 aaPredicted RBP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 TAS2R40P59535 323 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 NCBP2-AS2Q69YL0 99 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 ARHGAP36Q6ZRI8 547 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 Q6ZSR6 202 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 BZW1Q7L1Q6 419 aaKnown RBP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SPATS2Q86XZ4 545 aaKnown RBP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CAMK1DQ8IU85 385 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 NETO2Q8NC67 525 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 PCDH19Q8TAB3 1148 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SAP25Q8TEE9 199 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 ECHDC3Q96DC8 303 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 TSGA13Q96PP4 275 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 RNF157Q96PX1 679 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 MYOCQ99972 504 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 POLR1EQ9GZS1 481 aaKnown RBP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 FZD3Q9NPG1 666 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 PCDH12Q9NPG4 1184 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 KCTD5Q9NXV2 234 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 IMPACTQ9P2X3 320 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 ITM2BQ9Y287 266 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC12-209ENST00000604164 PCDHA13Q9Y5I0 950 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
CCDC12-209ENST00000604164 NEMP2A6NFY4 417 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
CCDC12-209ENST00000604164 MATN3O15232 486 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 PSTPIP1O43586 416 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 MFSD11O43934 449 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 BUB1BO60566 1050 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-209ENST00000604164 MMP20O60882 483 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 KRT1P04264 644 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 CDC25BP30305 580 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 THOP1P52888 689 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 CLDN2P57739 230 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 HNRNPKP61978 463 aaKnown RBP eCLIP11.64□□□□□ -0.559e-7■■□□□ 12.7
CCDC12-209ENST00000604164 YPEL5P62699 121 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 FAM193AP78312 1265 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 IL9RQ01113 521 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 FOXC1Q12948 553 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 FGL2Q14314 439 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 ATP13A4Q4VNC1 1196 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 GCNT7Q6ZNI0 430 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 OR13H1Q8NG92 308 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 ATL2Q8NHH9 583 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 BAHD1Q8TBE0 780 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-209ENST00000604164 VOPP1Q96AW1 172 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 HDAC11Q96DB2 347 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 WRAP53Q9BUR4 548 aaKnown RBP11.64□□□□□ -0.55
CCDC12-209ENST00000604164 BRD8Q9H0E9 1235 aa11.64□□□□□ -0.55
CCDC12-209ENST00000604164 EPN1Q9Y6I3 576 aaPredicted RBP11.64□□□□□ -0.55
CCDC12-209ENST00000604164 SPTY2D1-AS1A0A0U1RR47 76 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 TRAFD1O14545 582 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 APOL1O14791 398 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 PPP1R12AO14974 1030 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 SPINT1O43278 529 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 HTRA2O43464 458 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 NDUFA10O95299 355 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 LDOC1O95751 146 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 PEX11BO96011 259 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 ELFN1P0C7U0 828 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 FTH1P19P0C7X4 201 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 ALPPL2P10696 532 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CYP2A6P11509 494 aaPredicted RBP11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CCNB1P14635 433 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 CR2P20023 1033 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 COMTP21964 271 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 FECHP22830 423 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 MMP12P39900 470 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 RGRP47804 291 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 PEX5P50542 639 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 ITKQ08881 620 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 TFDP2Q14188 446 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 LRRC14Q15048 493 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 AGERQ15109 404 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 PDK1Q15118 436 aa11.63□□□□□ -0.55
CCDC12-209ENST00000604164 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms