RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 POLNQ7Z5Q5 900 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 SRLQ86TD4 932 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 TEKT4Q8WW24 435 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 CENPTQ96BT3 561 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 BTBD6Q96KE9 485 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 ATP13A3Q9H7F0 1226 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 CHD6Q8TD26 2715 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 TDRD6O60522 2096 aaKnown RBP18.29■□□□□ 0.52
CCDC12-208ENST00000603885 SRRM3A6NNA2 597 aaPredicted RBP18.28■□□□□ 0.52
CCDC12-208ENST00000603885 MYO1FO00160 1098 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 CBFA2T2O43439 604 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
CCDC12-208ENST00000603885 CSF2P04141 144 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 CAPNS1P04632 268 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 AMPD1P23109 780 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 ACP1P24666 158 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 IGFALSP35858 605 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 RGRP47804 291 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 THOP1P52888 689 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 NSUN2Q08J23 767 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC12-208ENST00000603885 PTK2BQ14289 1009 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 UGP2Q16851 508 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 TMCO4Q5TGY1 634 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 ERAP2Q6P179 960 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 PROSER1Q86XN7 944 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 MARCH9Q86YJ5 346 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 CAMK1DQ8IU85 385 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 ZNF599Q96NL3 588 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 CSPG4P5Q96PW8 444 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 PCDH12Q9NPG4 1184 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 NLGN3Q9NZ94 848 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 SEPT3Q9UH03 358 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 PKD1L2Q7Z442 2459 aa18.28■□□□□ 0.52
CCDC12-208ENST00000603885 KNTC1P50748 2209 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 TOR1BO14657 336 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 HNRNPH3P31942 346 aaKnown RBP18.27■□□□□ 0.52
CCDC12-208ENST00000603885 RENBPP51606 427 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 YPEL5P62699 121 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 DAB2P98082 770 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 SLC25A11Q02978 314 aaKnown RBP18.27■□□□□ 0.52
CCDC12-208ENST00000603885 BCL2L1Q07817 233 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 TRIM14Q14142 442 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 LBRQ14739 615 aaKnown RBP18.27■□□□□ 0.52
CCDC12-208ENST00000603885 TXNRD3NBQ6F5E7 133 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 TP53INP2Q8IXH6 220 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 PAF1Q8N7H5 531 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 PSKH2Q96QS6 385 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 CAAP1Q9H8G2 361 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 PCDH18Q9HCL0 1135 aa18.27■□□□□ 0.52
CCDC12-208ENST00000603885 TRABD2BA6NFA1 517 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 SCAMP1O15126 338 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 GIMD1P0DJR0 217 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 JUPP14923 745 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 JUNDP17535 347 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 SERPINB6P35237 376 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 EIF4A3P38919 411 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 MMP12P39900 470 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 SSR1P43307 286 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 AP1S1P61966 158 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 CAMK2BQ13554 666 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 KRT81Q14533 505 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 HADHQ16836 314 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 TPRG1LQ5T0D9 272 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 HES3Q5TGS1 186 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 SPECC1LQ69YQ0 1117 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 KDM7AQ6ZMT4 941 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 PDCD7Q8N8D1 485 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 TP53I13Q8NBR0 393 aaPredicted RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 ZNF548Q8NEK5 533 aaPredicted RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 MDM1Q8TC05 714 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 DUSP23Q9BVJ7 150 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 MBNL1Q9NR56 388 aaKnown RBP18.26■□□□□ 0.51
CCDC12-208ENST00000603885 ETNK2Q9NVF9 386 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 NENFQ9UMX5 172 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
CCDC12-208ENST00000603885 DSPP15924 2871 aaKnown RBP18.25■□□□□ 0.51
CCDC12-208ENST00000603885 ACACAQ13085 2346 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 TAF4O00268 1085 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 MUSKO15146 869 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 C6P13671 934 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 HSPA9P38646 679 aaKnown RBP18.25■□□□□ 0.51
CCDC12-208ENST00000603885 SCNN1BP51168 640 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 CDH6P55285 790 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 CLDN6P56747 220 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 SLC10A7Q0GE19 358 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 ZNF235Q14590 738 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 LRRC14Q15048 493 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 IRF4Q15306 451 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 ZSWIM9Q86XI8 627 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 ATPAF2Q8N5M1 289 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 BTN2A2Q8WVV5 523 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 CTNNBL1Q8WYA6 563 aaPredicted RBP18.25■□□□□ 0.51
CCDC12-208ENST00000603885 ECHDC3Q96DC8 303 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 TSPY26PQ9H489 355 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 EVA1BQ9NVM1 165 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 CTTNBP2NLQ9P2B4 639 aa18.25■□□□□ 0.51
CCDC12-208ENST00000603885 RCOR3Q9P2K3 495 aaPredicted RBP18.25■□□□□ 0.51
CCDC12-208ENST00000603885 DKK4Q9UBT3 224 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms