RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MARVELD2Q8N4S9 558 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 C7orf31Q8N865 590 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZSCAN18Q8TBC5 510 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CHTF18Q8WVB6 975 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PSPC1Q8WXF1 523 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 FBXL8Q96CD0 374 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 REXO5Q96IC2 774 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 MKRN2Q9H000 416 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 MAGEH1Q9H213 219 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KCNN2Q9H2S1 579 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PABPC3Q9H361 631 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SYTL2Q9HCH5 934 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 POLR3BQ9NW08 1133 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 DBR1Q9UK59 544 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SIK3Q9Y2K2 1263 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCM1Q15154 2024 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SALL1Q9NSC2 1324 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SLIT3O75094 1523 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SCN11AQ9UI33 1791 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 MIF4GDA9UHW6 222 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF263O14978 683 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 LDLRAD4O15165 306 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SLC22A1O15245 554 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 BUB1O43683 1085 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHGA12O60330 932 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 FKBP6O75344 327 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CD48P09326 243 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ARAFP10398 606 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PEX2P28328 305 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CAMLGP49069 296 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 DLG4P78352 724 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF33BQ06732 778 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 DUSP4Q13115 394 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SNTA1Q13424 505 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ADAM15Q13444 863 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KCNC3Q14003 757 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 DLGAP5Q15398 846 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 HLFQ16534 295 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 TRMT5Q32P41 509 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 LSM12Q3MHD2 195 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PPM1LQ5SGD2 360 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 UBE2UQ5VVX9 321 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 LPCAT4Q643R3 524 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ERICH5Q6P6B1 374 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PAPD4Q6PIY7 484 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 STOX1Q6ZVD7 989 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SV2BQ7L1I2 683 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 RRAGAQ7L523 313 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KRT74Q7RTS7 529 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SYT9Q86SS6 491 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 LRRTM4Q86VH4 590 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SVOPQ8N4V2 548 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 MB21D1Q8N884 522 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ASCC1Q8N9N2 400 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 GPR152Q8TDT2 470 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 FAM216AQ8WUB2 273 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CELF1Q92879 486 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ACDQ96AP0 544 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 FAM149B1Q96BN6 582 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 FAM227BQ96M60 508 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 C7orf26Q96N11 449 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SPATA13Q96N96 652 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PNMA5Q96PV4 448 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SLC29A1Q99808 456 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PARD6GQ9BYG4 376 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 TRIM15Q9C019 465 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 OPA3Q9H6K4 179 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 C1orf112Q9NSG2 853 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 NKIRAS1Q9NYS0 192 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ACTR10Q9NZ32 417 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CNOT7Q9UIV1 285 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 GDF2Q9UK05 429 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 APPL1Q9UKG1 709 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 B3GNT3Q9Y2A9 372 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 NEU2Q9Y3R4 380 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHGA9Q9Y5G4 932 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHGA7Q9Y5G6 932 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCDHGA6Q9Y5G7 932 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 BRWD3Q6RI45 1802 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF804BA4D1E1 1349 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 HEG1Q9ULI3 1381 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 C5P01031 1676 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 MYH6P13533 1939 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 MYH4Q9Y623 1939 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 A0A0B4J269 797 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 A0A1B0GWJ7 208 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 NEURL1BA8MQ27 555 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF891A8MT65 544 aaPredicted RBP4.76□□□□□ -1.65
LINC01109-201ENST00000603837 FZD9O00144 591 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 PEX1O43933 1283 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 CLN5O75503 358 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 RB1P06400 928 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 USP17L7P0C7H9 530 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 TAC1P20366 129 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 ADH6P28332 368 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 KCNJ10P78508 379 aa4.76□□□□□ -1.65
LINC01109-201ENST00000603837 LRRC63Q05C16 580 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms