RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 MTMR4Q9NYA4 1195 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 TMEM216Q9P0N5 145 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 CYTH4Q9UIA0 394 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 CDH22Q9UJ99 828 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 HEG1Q9ULI3 1381 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 DIP2BQ9P265 1576 aa8.94□□□□□ -0.98
COMMD3-215ENST00000602574 FAM92AA1XBS5 289 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 POM121CA8CG34 1229 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GRM8O00222 908 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 EEF2KO00418 725 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 FAM189A1O60320 539 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PRKD3O94806 890 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF30P17039 623 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GJA1P17302 382 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 S100PP25815 95 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GJC1P36383 396 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CPOXP36551 454 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 HTR3AP46098 478 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 RIDAP52758 137 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PPP5CP53041 499 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ITGA8P53708 1063 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 HAND2P61296 217 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CACNB1Q02641 598 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 EHHADHQ08426 723 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 COL9A3Q14050 684 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TRIM25Q14258 630 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GK3PQ14409 553 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PPP2R5DQ14738 602 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 EXOC3L4Q17RC7 722 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ATG14Q6ZNE5 492 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 RNF207Q6ZRF8 634 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 STRA8Q7Z7C7 330 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CATSPER3Q86XQ3 398 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ZSCAN29Q8IWY8 852 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 IL17RDQ8NFM7 739 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 OR13F1Q8NGS4 319 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 FBXO25Q8TCJ0 367 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TRPM4Q8TD43 1214 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PDCD6IPQ8WUM4 868 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 RFFLQ8WZ73 363 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 COPS5Q92905 334 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 MAGEB10Q96LZ2 347 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 EYA1Q99502 592 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 SORT1Q99523 831 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PYM1Q9BRP8 204 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GTPBP2Q9BX10 602 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 LDAHQ9H6V9 325 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 SLCO1B3Q9NPD5 702 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 HPF1Q9NWY4 346 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 SLC6A14Q9UN76 642 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 KCNK7Q9Y2U2 307 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 SLC22A7Q9Y694 548 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 HSPE1-MOB4S4R3N1 261 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF142P52746 1687 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 KIF1AQ12756 1690 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CAMTA1Q9Y6Y1 1673 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TMX2-CTNND1H3BSU7 103 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TFECO14948 347 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 FTCDO95954 541 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CCNE2O96020 404 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 XRCC5P13010 732 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 EIF2AK2P19525 551 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 SLC9A1P19634 815 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 OSBPP22059 807 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CRKP46108 304 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ARCN1P48444 511 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CDKL1Q00532 357 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PPATQ06203 517 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CHAF1BQ13112 559 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TNK1Q13470 666 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 MXD4Q14582 209 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CLEC16AQ2KHT3 1053 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 MAJINQ3KP22 176 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 DGKKQ5KSL6 1271 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 C6orf52Q5T4I8 152 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CNSTQ6PJW8 725 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TXNDC11Q6PKC3 985 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 DPY19L3Q6ZPD9 716 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TMEM26Q6ZUK4 368 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 BBS12Q6ZW61 710 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ANKS1BQ7Z6G8 1248 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 LINC00523Q86TU6 105 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 IRF2BP1Q8IU81 584 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 CPNE9Q8IYJ1 553 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 PI4KAP1Q8N8J0 262 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 C11orf65Q8NCR3 313 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 BEST2Q8NFU1 509 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 METTL6Q8TCB7 284 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ST8SIA4Q92187 359 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 DLG3Q92796 817 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ART4Q93070 314 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF518BQ9C0D4 1074 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 XKR8Q9H6D3 395 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 RANBP3Q9H6Z4 567 aaPredicted RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 TDRD3Q9H7E2 651 aaKnown RBP8.93□□□□□ -0.98
COMMD3-215ENST00000602574 MLXIPLQ9NP71 852 aa8.93□□□□□ -0.98
COMMD3-215ENST00000602574 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms