RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CCDC89Q8N998 374 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 HCAR2Q8TDS4 363 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 LRRN4Q8WUT4 740 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 VOPP1Q96AW1 172 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 IMP4Q96G21 291 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 ACOX2Q99424 681 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 GBA3Q9H227 469 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 GLOD4Q9HC38 313 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 KLHL8Q9P2G9 620 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 INVSQ9Y283 1065 aa11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-207ENST00000600804 A0A1W2PQF6 199 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ERI2A8K979 691 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 CDX4O14627 284 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 INSIG1O15503 277 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ZBTB24O43167 697 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 SOCS5O75159 536 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 SIN3BO75182 1162 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 KLF8O95600 359 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 EPOP01588 193 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 EPHX1P07099 455 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 FDFT1P37268 417 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 RECQLP46063 649 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 RGRP47804 291 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 NOVA1P51513 510 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 CCNHP51946 323 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 SEC13P55735 322 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 TUBB4BP68371 445 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 CREB5Q02930 508 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ZBTB16Q05516 673 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 RAD51Q06609 339 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 PTK6Q13882 451 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 STARD3Q14849 445 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 MYLK3Q32MK0 819 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ACCSLQ4AC99 568 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 GLE1Q53GS7 698 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 NCEH1Q6PIU2 408 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 LEKR1Q6ZMV7 388 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 DPY19L3Q6ZPD9 716 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ARHGEF18Q6ZSZ5 1173 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 Q6ZVU0 165 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 GSTA5Q7RTV2 222 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 PID1Q7Z2X4 250 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 DSG4Q86SJ6 1040 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 SRLQ86TD4 932 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 TXNDC5Q8NBS9 432 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 TMIEQ8NEW7 156 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 OR8D1Q8WZ84 308 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 ZNF641Q96N77 438 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 AGAP3Q96P47 875 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 FAM129BQ96TA1 746 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 KRT12Q99456 494 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 HEPHQ9BQS7 1158 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 OSBPL1AQ9BXW6 950 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 C10orf88Q9H8K7 445 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 PRSS16Q9NQE7 514 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 SEPT10Q9P0V9 454 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 HECAQ9UBI9 543 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 EBF1Q9UH73 591 aa11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 TP53BP1Q12888 1972 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-207ENST00000600804 BPTFQ12830 3046 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 A0A1W2PQ67 120 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 GOLGA6CA6NDK9 693 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 HTRA2O43464 458 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 SYNCRIPO60506 623 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 ANXA9O76027 345 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 IFNB1P01574 187 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 KRT14P02533 472 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 PRNPP04156 253 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 MMP2P08253 660 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 SERPINF2P08697 491 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 GOLGA6DP0CG33 693 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 HLA-EP13747 358 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 HOXB2P14652 356 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 RPL22P35268 128 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 MAGEA6P43360 314 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 NUMBP49757 651 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 SCNN1BP51168 640 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 DGKEP52429 567 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 DR1Q01658 176 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 FOXC1Q12948 553 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 SEMA5AQ13591 1074 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 CRY1Q16526 586 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 PMS2CLQ68D20 193 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 PRPF39Q86UA1 669 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 KDF1Q8NAX2 398 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 OR2T3Q8NH03 318 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 CCDC110Q8TBZ0 833 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 GATA6Q92908 595 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 SEMA3CQ99985 751 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 TM6SF2Q9BZW4 377 aa11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-207ENST00000600804 ATP13A3Q9H7F0 1226 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms