RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 AK5Q9Y6K8 562 aa11.63□□□□□ -0.55
ARHGEF1-220ENST00000600274 FAM155AB1AL88 458 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 ADAM12O43184 909 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 TM7SF2O76062 418 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 COX4I1P13073 169 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 RPL14P50914 215 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 NSUN2Q08J23 767 aaKnown RBP eCLIP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 KLF10Q13118 480 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 INSCQ1MX18 579 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 FSCBQ5H9T9 825 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 LIPMQ5VYY2 423 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 CLEC6AQ6EIG7 209 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 IZUMO2Q6UXV1 221 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 CYS1Q717R9 158 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 DNAJC1Q96KC8 554 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 PRDM16Q9HAZ2 1276 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 OXSMQ9NWU1 459 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 RAD54BQ9Y620 910 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 SCN4AP35499 1836 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 GPC4O75487 556 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 LMNAP02545 664 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 SPATA31D3P0C874 917 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 KCNA5P22460 613 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 OR1D2P34982 312 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC11A1P49279 550 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 LPCAT4Q643R3 524 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 SPATA31D4Q6ZUB0 917 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 SH3RF2Q8TEC5 729 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 RCN3Q96D15 328 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 UROC1Q96N76 676 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 IL12RB2Q99665 862 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 FAM96AQ9H5X1 160 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 IL1RL2Q9HB29 575 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 TLR8Q9NR97 1041 aaKnown RBP11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDYLQ9Y232 598 aa11.62□□□□□ -0.55
ARHGEF1-220ENST00000600274 A8MX80 341 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 PSMD3O43242 534 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 SNUPNO95149 360 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 GNAZP19086 355 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 CYP2C18P33260 490 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDK7P50613 346 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 HTRA3P83110 453 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 ART3Q13508 389 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRIM67Q6ZTA4 783 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 DCBLD1Q8N8Z6 715 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TXNDC5Q8NBS9 432 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 OR6K2Q8NGY2 324 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 RAB3IL1Q8TBN0 382 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 NPAS2Q99743 824 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 MAP3K13O43283 966 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 WFS1O76024 890 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 GJB5O95377 273 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 INHAP05111 366 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TYMPP19971 482 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 ATP6V1C1P21283 382 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 AP2B1P63010 937 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TUBB3Q13509 450 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 FAM83EQ2M2I3 478 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 SIRPB2Q5JXA9 342 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 FUT10Q6P4F1 479 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 POTEHQ6S545 545 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 PCDH20Q8N6Y1 951 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 CDRT15Q96T59 188 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 RGS18Q9NS28 235 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 UTP6Q9NYH9 597 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 NCKIPSDQ9NZQ3 722 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 NEU3Q9UQ49 428 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TLR6Q9Y2C9 796 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 KIAA0100Q14667 2235 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 HEATR9A2RTY3 570 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 F5H5T6 163 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 HDAC3O15379 428 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 BTKQ06187 659 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 TRIP10Q15642 601 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 ANKRD49Q8WVL7 239 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 AUTS2Q8WXX7 1259 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 SLC25A51Q9H1U9 297 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 MRPL46Q9H2W6 279 aaKnown RBP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 CCDC167Q9P0B6 97 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 GIMAP2Q9UG22 337 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 ARHGAP26Q9UNA1 814 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 PCDHGC4Q9Y5F7 938 aa11.61□□□□□ -0.55
ARHGEF1-220ENST00000600274 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 LRRC14BA6NHZ5 514 aa11.6□□□□□ -0.55
ARHGEF1-220ENST00000600274 MUSKO15146 869 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms