RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PRCPP42785 496 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 MXI1P50539 228 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 CDH4P55283 916 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 MC1RQ01726 317 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 CLPPQ16740 277 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 ATP1A1-AS1Q5TC04 95 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 CAVIN1Q6NZI2 390 aaKnown RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 RD3Q7Z3Z2 195 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 SMYD4Q8IYR2 804 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 DCAF4L2Q8NA75 395 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 KIAA1143Q96AT1 154 aaPredicted RBP17.83■□□□□ 0.44
SSBP4-207ENST00000600244 VOPP1Q96AW1 172 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 KCTD3Q9Y597 815 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 NF1P21359 2839 aa17.83■□□□□ 0.44
SSBP4-207ENST00000600244 LRP4O75096 1905 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 APCP25054 2843 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 PPP1R3GB7ZBB8 358 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 M0QYV0 167 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 BIN1O00499 593 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 LDLRP01130 860 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 PAEPP09466 180 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 SLC2A3P11169 496 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 CD44P16070 742 aaKnown RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 MAP4P27816 1152 aaKnown RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 CCNHP51946 323 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 SRP54P61011 504 aaKnown RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 TRA2AQ13595 282 aaKnown RBP eCLIP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 EIF2S3LQ2VIR3 472 aaKnown RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 EDRF1Q3B7T1 1238 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 CARD16Q5EG05 197 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 KCTD16Q68DU8 428 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 ISM2Q6H9L7 571 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 ENPP7Q6UWV6 458 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 UNC5BQ8IZJ1 945 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 NLGN4XQ8N0W4 816 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 NLGN4YQ8NFZ3 816 aaPredicted RBP17.82■□□□□ 0.44
SSBP4-207ENST00000600244 STARD8Q92502 1023 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 TCTN2Q96GX1 697 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 CCDC74BQ96LY2 380 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 TRIM62Q9BVG3 475 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 CEP44Q9C0F1 390 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 SLC39A1Q9NY26 324 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 MAPK8IP1Q9UQF2 711 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 HS3ST4Q9Y661 456 aa17.82■□□□□ 0.44
SSBP4-207ENST00000600244 ADGRG4Q8IZF6 3080 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 A0A0D9SEW6 157 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 MMP20O60882 483 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 TM7SF2O76062 418 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 PDGFAP04085 211 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 TCN2P20062 427 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 CCR1P32246 355 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 LIMK2P53671 638 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 OR1D5P58170 312 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 YWHAEP62258 255 aaKnown RBP17.81■□□□□ 0.44
SSBP4-207ENST00000600244 ZCWPW2Q504Y3 356 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 TIPARPQ7Z3E1 657 aaKnown RBP17.81■□□□□ 0.44
SSBP4-207ENST00000600244 PCDH20Q8N6Y1 951 aaKnown RBP17.81■□□□□ 0.44
SSBP4-207ENST00000600244 AGBL5Q8NDL9 886 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 CCDC112Q8NEF3 446 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 FAM46DQ8NEK8 389 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 MOCOSQ96EN8 888 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 POPDC2Q9HBU9 364 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 COQ4Q9Y3A0 265 aa17.81■□□□□ 0.44
SSBP4-207ENST00000600244 B4E171 279 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ZMPSTE24O75844 475 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 RHOCP08134 193 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 CD1CP29017 333 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 GGCXP38435 758 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 PPP1R2P41236 205 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 TSPAN7P41732 249 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ABHD18Q0P651 414 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 NFATC4Q14934 902 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 NR1D2Q14995 579 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 IRF4Q15306 451 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 AMZ1Q400G9 498 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ALFQ53S48 1182 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ZNF805Q5CZA5 627 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 DCAF12Q5T6F0 453 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 C16orf46Q6P387 395 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ZNF438Q7Z4V0 828 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ARHGEF26Q96DR7 871 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 C1QTNF7Q9BXJ2 289 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 OCIAD1Q9NX40 245 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 DKK3Q9UBP4 350 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 ERRFI1Q9UJM3 462 aaPredicted RBP17.8■□□□□ 0.44
SSBP4-207ENST00000600244 DGKBQ9Y6T7 804 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 HIVEP1P15822 2718 aa17.8■□□□□ 0.44
SSBP4-207ENST00000600244 TNFP01375 233 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
SSBP4-207ENST00000600244 YWHAZP63104 245 aaKnown RBP17.79■□□□□ 0.44
SSBP4-207ENST00000600244 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 STILQ15468 1287 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 ANKS6Q68DC2 871 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 FOXR2Q6PJQ5 311 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 SETD3Q86TU7 594 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-207ENST00000600244 C17orf82Q86X59 251 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-207ENST00000600244 PLPP6Q8IY26 295 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 SLC34A3Q8N130 599 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms