RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TCEAL3Q969E4 200 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 SIPA1Q96FS4 1042 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 LRIG1Q96JA1 1093 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 SEMA3CQ99985 751 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 EDEM2Q9BV94 578 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 NOD2Q9HC29 1040 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 GLOD4Q9HC38 313 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 KLHL8Q9P2G9 620 aaPredicted RBP19.05■□□□□ 0.64
CCDC9-205ENST00000600117 IGSF10Q6WRI0 2623 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 FLNBO75369 2602 aaKnown RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 C5orf60A6NFR6 353 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 GIPC1O14908 333 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 MID1O15344 667 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 RNASEH1O60930 286 aaKnown RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 NEBLO76041 1014 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 IL1BP01584 269 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 MMP2P08253 660 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 SLC8A1P32418 973 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 MAPK8P45983 427 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 KCNJ1P48048 391 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ZBTB16Q05516 673 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 PLK5Q496M5 336 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 KIAA1324Q6UXG2 1013 aaKnown RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF592Q92610 1267 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 PRCCQ92733 491 aaPredicted RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 MAGOHBQ96A72 148 aaKnown RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ARRDC3Q96B67 414 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 SPATA13Q96N96 652 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 TUBGCP5Q96RT8 1024 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 FERMT1Q9BQL6 677 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 PABPC3Q9H361 631 aaKnown RBP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 CD93Q9NPY3 652 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 SCUBE2Q9NQ36 999 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 BCCIPQ9P287 314 aaKnown RBP eCLIP19.04■□□□□ 0.64
CCDC9-205ENST00000600117 TRHDEQ9UKU6 1024 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF148Q9UQR1 794 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 TTLL3Q9Y4R7 772 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ANKRD36A6QL64 1941 aa19.04■□□□□ 0.64
CCDC9-205ENST00000600117 ASCC3Q8N3C0 2202 aaKnown RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 SRRM3A6NNA2 597 aaPredicted RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 C4orf47A7E2U8 309 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 C1QTNF3-AMACRE9PGA6 284 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF500O60304 480 aaPredicted RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 PHF2O75151 1096 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 PIGNO95427 931 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ADH1BP00325 375 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 NFKB1P19838 968 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 C5AR1P21730 350 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 CES1P23141 567 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 STIP1P31948 543 aaKnown RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 DRD3P35462 400 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 SKOR1P84550 965 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 RAD51Q06609 339 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ITKQ08881 620 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 POM121L1PQ3SYA9 428 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ANKRD20A2Q5SQ80 823 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ANKRD20A1Q5TYW2 823 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ANKRD20A3Q5VUR7 823 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 GDPD4Q6W3E5 623 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 PID1Q7Z2X4 250 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 PRPF39Q86UA1 669 aaKnown RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 PGBD3Q8N328 593 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 AADATQ8N5Z0 425 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 CCDC110Q8TBZ0 833 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 GATA6Q92908 595 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 TADA1Q96BN2 335 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 IMP4Q96G21 291 aaKnown RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 TPSD1Q9BZJ3 242 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 DUSP15Q9H1R2 295 aaPredicted RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 SLC25A51Q9H1U9 297 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 HAUS2Q9NVX0 235 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 USP36Q9P275 1121 aaKnown RBP19.03■□□□□ 0.64
CCDC9-205ENST00000600117 CDC23Q9UJX2 597 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 ABCA7Q8IZY2 2146 aa19.03■□□□□ 0.64
CCDC9-205ENST00000600117 GOLGA6L10A0A0M3HER8 536 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.02■□□□□ 0.64
CCDC9-205ENST00000600117 PCNX2A6NKB5 2137 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 ESPNB1AK53 854 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 TRAFD1O14545 582 aaPredicted RBP19.02■□□□□ 0.64
CCDC9-205ENST00000600117 GCATO75600 419 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 URI1O94763 535 aaPredicted RBP19.02■□□□□ 0.64
CCDC9-205ENST00000600117 STK10O94804 968 aaKnown RBP19.02■□□□□ 0.64
CCDC9-205ENST00000600117 DNTTP04053 509 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 UGT2B4P06133 528 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 COILP38432 576 aaPredicted RBP19.02■□□□□ 0.64
CCDC9-205ENST00000600117 PAFAH1B1P43034 410 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 TRAF2Q12933 501 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 GRM3Q14832 879 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 ELF2Q15723 593 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 FAM46CQ5VWP2 391 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 CAMK1DQ8IU85 385 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 GLIS1Q8NBF1 620 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 KIF18AQ8NI77 898 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 FAM131CQ96AQ9 280 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 FCRL5Q96RD9 977 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 GORASP1Q9BQQ3 440 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 OSBPL1AQ9BXW6 950 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 GBA3Q9H227 469 aa19.02■□□□□ 0.64
CCDC9-205ENST00000600117 ATP13A3Q9H7F0 1226 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms