RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 GSE1Q14687 1217 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 UGP2Q16851 508 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 RALGPS1Q5JS13 557 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 MEI1Q5TIA1 1274 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 FBXL19Q6PCT2 694 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 LAYNQ6UX15 382 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 CCDC50Q8IVM0 306 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 REXO1L1PQ8IX06 675 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 TMEM145Q8NBT3 493 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 SNX19Q92543 992 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 HAUS1Q96CS2 278 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 MIR1-1HGQ9H1L0 117 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 ATP13A3Q9H7F0 1226 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 LZTFL1Q9NQ48 299 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 SUSD2Q9UGT4 822 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 TPX2Q9ULW0 747 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 SLC6A14Q9UN76 642 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 PCDHGC4Q9Y5F7 938 aa19.68■□□□□ 0.74
SHKBP1-221ENST00000599833 APOC4-APOC2K7ER74 178 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 SOCS5O75159 536 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 JCHAINP01591 159 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 APOC2P02655 101 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 PRKCGP05129 697 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 MMP12P39900 470 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 MAPK8P45983 427 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 DSC2Q02487 901 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 WASHC5Q12768 1159 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 RALGDSQ12967 914 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 NOMO1Q15155 1222 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 BRAT1Q6PJG6 821 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 CCNYQ8ND76 341 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 TADA1Q96BN2 335 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 QKIQ96PU8 341 aaKnown RBP eCLIP19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 SEMA3CQ99985 751 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 C1QTNF2Q9BXJ5 285 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 CEP41Q9BYV8 373 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 POLR1EQ9GZS1 481 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 BRD8Q9H0E9 1235 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 PCDH12Q9NPG4 1184 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 SCUBE2Q9NQ36 999 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 CABIN1Q9Y6J0 2220 aa19.67■□□□□ 0.74
SHKBP1-221ENST00000599833 UPK3BL1B0FP48 263 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 UPK3BL2E5RIL1 263 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 PPP1R12AO14974 1030 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 RAD51BO15315 384 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 TSPAN6O43657 245 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 FOXD2O60548 495 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 ENGP17813 658 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 GM2AP17900 193 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 SERPINA4P29622 427 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 GRIA4P48058 902 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 LIMK1P53667 647 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 RACK1P63244 317 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 LMNB2Q03252 620 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 BCL2L1Q07817 233 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 CCDC15Q0P6D6 951 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 GRIK2Q13002 908 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 TMEM52BQ4KMG9 183 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 ODF2Q5BJF6 829 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 KIAA1161Q6NSJ0 714 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 RABEPKQ7Z6M1 372 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 TTC7BQ86TV6 843 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 NSMCE1Q8WV22 266 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 P3H4Q92791 437 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 KLK6Q92876 244 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 KLF6Q99612 283 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 EDEM2Q9BV94 578 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 DMTF1Q9Y222 760 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 CA5BQ9Y2D0 317 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 PPIL1Q9Y3C6 166 aa19.66■□□□□ 0.74
SHKBP1-221ENST00000599833 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 TCRBV7S2A1N4TA0A589 114 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 TM4SF5O14894 197 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PGLSO95336 258 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PRLP01236 227 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 CFIP05156 583 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PDHA1P08559 390 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PRLRP16471 622 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PTPN3P26045 913 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 CD68P34810 354 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 CSNK1EP49674 416 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 SUOXP51687 545 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 AP1B1Q10567 949 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PTPRRQ15256 657 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 NAPEPLDQ6IQ20 393 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 BBS5Q8N3I7 341 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 UBL4BQ8N7F7 174 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 OR2I1PQ8NGU4 316 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 ACTL9Q8TC94 416 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 PIH1D2Q8WWB5 315 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 TLR10Q9BXR5 811 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 C10orf88Q9H8K7 445 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 CACNA1AO00555 2505 aa19.65■□□□□ 0.74
SHKBP1-221ENST00000599833 A0A1B0GVT2 93 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 IGLON5A6NGN9 336 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 PRR5-ARHGAP8B1AHC4 643 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 ARHGAP33O14559 1287 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 VILLO15195 856 aa19.64■□□□□ 0.73
SHKBP1-221ENST00000599833 PCDH8O95206 1070 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms